RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 LRRC4Q9HBW1 653 aa11.48□□□□□ -0.57
TMEM116-215ENST00000552374 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-215ENST00000552374 SPHK2Q9NRA0 654 aa11.48□□□□□ -0.57
TMEM116-215ENST00000552374 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
TMEM116-215ENST00000552374 WDR87Q6ZQQ6 2873 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 K7EQS6 105 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 XPO1O14980 1071 aaKnown RBP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 HRO43593 1189 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 ZBED1O96006 694 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 PAEPP09466 180 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 KRT5P13647 590 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 BRD2P25440 801 aaKnown RBP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 BCAT1P54687 386 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 YWHAGP61981 247 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 BST2Q10589 180 aaKnown RBP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 EFEMP1Q12805 493 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 SIM2Q14190 667 aaPredicted RBP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 GAB4Q2WGN9 574 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 RAB41Q5JT25 222 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 TPGS1Q6ZTW0 290 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 HTR3DQ70Z44 454 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 RSRC2Q7L4I2 434 aaKnown RBP11.47□□□□□ -0.57
TMEM116-215ENST00000552374 LONP2Q86WA8 852 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 ARHGAP18Q8N392 663 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 UBR7Q8N806 425 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 RUBCNQ92622 972 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 OTUB2Q96DC9 234 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 PNKPQ96T60 521 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 ULBP1Q9BZM6 244 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 NUP62CLQ9H1M0 184 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 NCDNQ9UBB6 729 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 RASAL2Q9UJF2 1139 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
TMEM116-215ENST00000552374 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 ANTXRLA6NF34 631 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 O00370 1275 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 PIK3R2O00459 728 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 APODP05090 189 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 LCP1P13796 627 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 MTIF2P46199 727 aaKnown RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 RGS7P49802 495 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 KDSRQ06136 332 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 ADIGQ0VDE8 80 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 CNGA2Q16280 664 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 EMC10Q5UCC4 262 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 LCLAT1Q6UWP7 414 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 C12orf40Q86WS4 652 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 SFTPA1Q8IWL2 248 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 KIAA2013Q8IYS2 634 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 CCDC33Q8N5R6 958 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 CCDC26Q8TAB7 109 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 BHMTQ93088 406 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 KREMEN1Q96MU8 473 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 ARHGEF4Q9NR80 690 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 SMG5Q9UPR3 1016 aaKnown RBP11.46□□□□□ -0.57
TMEM116-215ENST00000552374 MIA3Q5JRA6 1907 aa11.46□□□□□ -0.57
TMEM116-215ENST00000552374 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.58
TMEM116-215ENST00000552374 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
TMEM116-215ENST00000552374 KAT7O95251 611 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 SLC9A1P19634 815 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 HOXA6P31267 233 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 TIE1P35590 1138 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 USP8P40818 1118 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 MFAP3P55082 362 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 COG7P83436 770 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 GCNT1Q02742 428 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 DMC1Q14565 340 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 DPCR1Q3MIW9 517 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 PM20D1Q6GTS8 502 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 PMF1Q6P1K2 205 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 CLEC17AQ6ZS10 378 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 CEP68Q76N32 757 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 IRF2BP1Q8IU81 584 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 ZNF276Q8N554 614 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 USP33Q8TEY7 942 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 RNF139Q8WU17 664 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 ZSWIM1Q9BR11 485 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 EPC1Q9H2F5 836 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 DEC1Q9P2X7 70 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 COL4A2P08572 1712 aa11.45□□□□□ -0.58
TMEM116-215ENST00000552374 SLC12A8A0AV02 714 aa11.44□□□□□ -0.58
TMEM116-215ENST00000552374 YJEFN3A6XGL0 299 aa11.44□□□□□ -0.58
TMEM116-215ENST00000552374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-215ENST00000552374 E7ENQ6 273 aa11.44□□□□□ -0.58
TMEM116-215ENST00000552374 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
TMEM116-215ENST00000552374 M0QYV0 167 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms