RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NEDD8-MDP1E9PL57 170 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 ZDHHC11BP0C7U3 371 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 CD59P13987 128 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 GNSP15586 552 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 NDUFV2P19404 249 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 HOXD13P35453 343 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 FAM193AP78312 1265 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 ASIC1P78348 528 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 AMPD3Q01432 767 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 GOLGA8FQ08AF8 430 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 GOLGA8DPQ0D2H9 430 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 SLC39A14Q15043 492 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 TRIP6Q15654 476 aaKnown RBP15.02■□□□□ -0
CHMP1A-210ENST00000551981 PLEKHG6Q3KR16 790 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 WDR45BQ5MNZ6 344 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 EGFLAMQ63HQ2 1017 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 RAB44Q7Z6P3 723 aaPredicted RBP15.02■□□□□ -0
CHMP1A-210ENST00000551981 RGL4Q8IZJ4 473 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 ZNF507Q8TCN5 953 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
CHMP1A-210ENST00000551981 FOXJ1Q92949 421 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 BBS2Q9BXC9 721 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 CUEDC2Q9H467 287 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 IL37Q9NZH6 218 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 WDR35Q9P2L0 1181 aa15.02■□□□□ -0
CHMP1A-210ENST00000551981 LSM7Q9UK45 103 aaKnown RBP15.02■□□□□ -0
CHMP1A-210ENST00000551981 FAM92AA1XBS5 289 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 CACNG3O60359 315 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 TLR5O60602 858 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 AP1G2O75843 785 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 ZNF699Q32M78 642 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 FAM26FQ5R3K3 315 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 FAM173BQ6P4H8 233 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 HTR3DQ70Z44 454 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 EPM2AIP1Q7L775 607 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 PROSER1Q86XN7 944 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 MIB1Q86YT6 1006 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 SLC41A1Q8IVJ1 513 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 OR2I1PQ8NGU4 316 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 ZNF419Q96HQ0 510 aaPredicted RBP15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 GABRG3Q99928 467 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 TRIM9Q9C026 710 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 XYLT2Q9H1B5 865 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 FBXO44Q9H4M3 255 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 SMYD3Q9H7B4 428 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.012e-11■■■■■ 173.1
CHMP1A-210ENST00000551981 TLR8Q9NR97 1041 aaKnown RBP15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 KRT82Q9NSB4 513 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 KBTBD4Q9NVX7 518 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 HCN2Q9UL51 889 aa15.01□□□□□ -0.01
CHMP1A-210ENST00000551981 TRIM24O15164 1050 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 CLIC2O15247 247 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 TGFB1I1O43294 461 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 SH3BP5O60239 455 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 TYRP14679 529 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 BIRC3Q13489 604 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 ZNF667Q5HYK9 610 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 ACOX2Q99424 681 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 ZDHHC5Q9C0B5 715 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 VRTNQ9H8Y1 702 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 MARK1Q9P0L2 795 aa15□□□□□ -0.01
CHMP1A-210ENST00000551981 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
CHMP1A-210ENST00000551981 IGSF10Q6WRI0 2623 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 GFRA2O00451 464 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 P4HA1P13674 534 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 SYT1P21579 422 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 ATP5C1P36542 298 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 DGKGP49619 791 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 AP3M2P53677 418 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 CDH8P55286 799 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 CUL4AQ13619 759 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 STARD3Q14849 445 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 STK38Q15208 465 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 KIAA1324Q6UXG2 1013 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 SCARA5Q6ZMJ2 495 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 TPGS1Q6ZTW0 290 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 PAQR9Q6ZVX9 377 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 NAXDQ8IW45 347 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 NELFCDQ8IXH7 590 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 FUKQ8N0W3 1084 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 ADAMTS14Q8WXS8 1223 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 ZNF516Q92618 1163 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 WBP2Q969T9 261 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 MRGPRX1Q96LB2 322 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 USP28Q96RU2 1077 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 CD248Q9HCU0 757 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 ADAMTS20P59510 1910 aa14.99□□□□□ -0.01
CHMP1A-210ENST00000551981 MEI4A8MW99 385 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 PRRT4C9JH25 899 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 EXOC3O60645 756 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 GJB3O75712 270 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 FTH1P19P0C7X4 201 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 CD6P30203 668 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 SCAPQ12770 1279 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 E2F4Q16254 413 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 CNNM4Q6P4Q7 775 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 IQUBQ8NA54 791 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms