RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 BPIFB1Q8TDL5 484 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 CPA5Q8WXQ8 436 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 LRRC3BQ96PB8 259 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
DDX54-209ENST00000551912 ABCC13Q9NSE7 274 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 SEPT11Q9NVA2 429 aaKnown RBP19.57■□□□□ 0.72
DDX54-209ENST00000551912 SMPD4Q9NXE4 827 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 TJP2Q9UDY2 1190 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 DUSP12Q9UNI6 340 aa19.57■□□□□ 0.72
DDX54-209ENST00000551912 DCXO43602 365 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 TBX18O95935 607 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 LTFP02788 710 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 ERBB2P04626 1255 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 SRFP11831 508 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 TCF3P15923 654 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 ZNF75DP51815 510 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 KLHL30Q0D2K2 578 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 HFE2Q6ZVN8 426 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 RSRC2Q7L4I2 434 aaKnown RBP19.56■□□□□ 0.72
DDX54-209ENST00000551912 TTC16Q8NEE8 873 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 SH3RF2Q8TEC5 729 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 RNF139Q8WU17 664 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 FAM149B1Q96BN6 582 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 PCDHB18PQ96TA0 734 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 HAUS4Q9H6D7 363 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 DNMT3LQ9UJW3 386 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 NUDT5Q9UKK9 219 aa19.56■□□□□ 0.72
DDX54-209ENST00000551912 LEFTY2O00292 366 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 NARSO43776 548 aaKnown RBP19.55■□□□□ 0.72
DDX54-209ENST00000551912 TRIOO75962 3097 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 UNGP13051 313 aaPredicted RBP19.55■□□□□ 0.72
DDX54-209ENST00000551912 ALADP13716 330 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 TNFAIP3P21580 790 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 FCHO2Q0JRZ9 810 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 USP4Q13107 963 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 ZNF77Q15935 545 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 CLEC16AQ2KHT3 1053 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 OR6B2Q6IFH4 312 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 FAM183BPQ6ZVS7 135 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 DDX42Q86XP3 938 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX54-209ENST00000551912 EDEM1Q92611 657 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 KHSRPQ92945 711 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX54-209ENST00000551912 C18orf8Q96DM3 657 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 MRFAP1L1Q96HT8 127 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 SYT11Q9BT88 431 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 TRIM62Q9BVG3 475 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 SMOC2Q9H3U7 446 aa19.55■□□□□ 0.72
DDX54-209ENST00000551912 OLA1Q9NTK5 396 aaKnown RBP19.55■□□□□ 0.72
DDX54-209ENST00000551912 THG1LQ9NWX6 298 aaKnown RBP19.55■□□□□ 0.72
DDX54-209ENST00000551912 BZW2Q9Y6E2 419 aaKnown RBP19.55■□□□□ 0.72
DDX54-209ENST00000551912 FAM170AA1A519 330 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 ZNF263O14978 683 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 MDM4O15151 490 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 SKILP12757 684 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 GDI1P31150 447 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 NSFP46459 744 aaKnown RBP19.54■□□□□ 0.72
DDX54-209ENST00000551912 GABRB2P47870 512 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 GPC5P78333 572 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 ZXDAP98168 799 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 ZXDBP98169 803 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 GOLGA8FQ08AF8 430 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 GOLGA8DPQ0D2H9 430 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 EFEMP1Q12805 493 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 MTF1Q14872 753 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 CC2D1AQ6P1N0 951 aaPredicted RBP19.54■□□□□ 0.72
DDX54-209ENST00000551912 TOGARAM2Q6ZUX3 1019 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 TMC6Q7Z403 805 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 ZDHHC17Q8IUH5 632 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 ZFRQ96KR1 1074 aaKnown RBP19.54■□□□□ 0.72
DDX54-209ENST00000551912 BRD9Q9H8M2 597 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 SLC2A4RGQ9NR83 387 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 STRIP2Q9ULQ0 834 aa19.54■□□□□ 0.72
DDX54-209ENST00000551912 HELZP42694 1942 aaKnown RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 CHADO15335 359 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 SERPING1P05155 500 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 GLI1P08151 1106 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 MMP8P22894 467 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 YWHAZP63104 245 aaKnown RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 CENPCQ03188 943 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 ARHGAP29Q52LW3 1261 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 TDRD12Q587J7 1177 aaKnown RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 EFHC1Q5JVL4 640 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 BEND5Q7L4P6 421 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 ZNF571Q7Z3V5 609 aaPredicted RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 MIB1Q86YT6 1006 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 OR8K1Q8NGG5 319 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 SLC30A5Q8TAD4 765 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 RIN3Q8TB24 985 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 IRF7Q92985 503 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 PIWIL1Q96J94 861 aaKnown RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 KLF16Q9BXK1 252 aaPredicted RBP19.53■□□□□ 0.72
DDX54-209ENST00000551912 POPDC2Q9HBU9 364 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 ASNSD1Q9NWL6 643 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 MARCH2Q9P0N8 246 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 CFAP97Q9P2B7 532 aa19.53■□□□□ 0.72
DDX54-209ENST00000551912 PI4K2BG5E9Z4 385 aa19.52■□□□□ 0.72
DDX54-209ENST00000551912 CAPN9O14815 690 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms