RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
TROAP-213ENST00000550709 PIAS3Q9Y6X2 628 aa14.42□□□□□ -0.1
TROAP-213ENST00000550709 E5RJQ4 531 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 HMBSP08397 361 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 ACADSBP45954 432 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 DAOAP59103 153 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 NR1I3Q14994 352 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 ITPRIPL2Q3MIP1 535 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 BMP8AQ7Z5Y6 402 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 DDX42Q86XP3 938 aaKnown RBP eCLIP14.41□□□□□ -0.1
TROAP-213ENST00000550709 FBXL6Q8N531 539 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 STK32AQ8WU08 396 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 RNF139Q8WU17 664 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 SLC20A1Q8WUM9 679 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 OSCP1Q8WVF1 389 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 WBP2Q969T9 261 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 PPP1R13BQ96KQ4 1090 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 CPXM1Q96SM3 734 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 KLF16Q9BXK1 252 aaPredicted RBP14.41□□□□□ -0.1
TROAP-213ENST00000550709 LHX5Q9H2C1 402 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 HPS4Q9NQG7 708 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 IFNKQ9P0W0 207 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 TJP2Q9UDY2 1190 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 SH3BP1Q9Y3L3 701 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 CEP83Q9Y592 693 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 PTPRDP23468 1912 aa14.41□□□□□ -0.1
TROAP-213ENST00000550709 OTOL1A6NHN0 477 aaPredicted RBP14.4□□□□□ -0.1
TROAP-213ENST00000550709 PI15O43692 258 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 FBXO21O94952 628 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 MMEP08473 750 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 VCPP55072 806 aaKnown RBP14.4□□□□□ -0.1
TROAP-213ENST00000550709 PRKCQQ04759 706 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 RUNX3Q13761 415 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 UBXN2BQ14CS0 331 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 PDGFRLQ15198 375 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 MEA1Q16626 185 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 SMYD5Q6GMV2 418 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 ASTLQ6HA08 431 aaPredicted RBP14.4□□□□□ -0.1
TROAP-213ENST00000550709 EPS8L1Q8TE68 723 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
TROAP-213ENST00000550709 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 FAM149B1Q96BN6 582 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 NOX5Q96PH1 765 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
TROAP-213ENST00000550709 SLC4A5Q9BY07 1137 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 SYNCQ9H7C4 482 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 TRPV5Q9NQA5 729 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 MARCH2Q9P0N8 246 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 DAAM1Q9Y4D1 1078 aa14.4□□□□□ -0.1
TROAP-213ENST00000550709 A0A1W2PQC6 194 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 SLC12A8A0AV02 714 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 PAPSS1O43252 624 aaPredicted RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 LTFP02788 710 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 TCF3P15923 654 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 RPL34P49207 117 aaKnown RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 STARD6P59095 220 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 ZNF445P59923 1031 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 GOLGA8FQ08AF8 430 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 GOLGA8DPQ0D2H9 430 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 EML3Q32P44 896 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 CWF19L1Q69YN2 538 aaKnown RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 KLHDC10Q6PID8 442 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 ZNF852Q6ZMS4 543 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 TMEM110Q86TL2 294 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 SCML4Q8N228 414 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 TMEM35BQ8NCS4 154 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 CPA5Q8WXQ8 436 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 IRGQQ8WZA9 623 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 FAM3CQ92520 227 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 ATP2A3Q93084 1043 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 SFMBT1Q9UHJ3 866 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 NOCTQ9UK39 431 aaKnown RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 STRIP2Q9ULQ0 834 aa14.39□□□□□ -0.11
TROAP-213ENST00000550709 NDRG2Q9UN36 371 aaKnown RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 MTF2Q9Y483 593 aaPredicted RBP14.39□□□□□ -0.11
TROAP-213ENST00000550709 ZDBF2Q9HCK1 2354 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 E2F8A0AVK6 867 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 SPECC1L-ADORA2AF8WAN1 911 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 SLC9A3R1O14745 358 aaPredicted RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 ERBB2P04626 1255 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 CHRNB2P17787 502 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 CDR2Q01850 454 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 NAA35Q5VZE5 725 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 OR6B2Q6IFH4 312 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 CPA6Q8N4T0 437 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 TMEM105Q8N8V8 129 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 XPO4Q9C0E2 1151 aaKnown RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 C8orf33Q9H7E9 229 aaPredicted RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 ECT2Q9H8V3 914 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 ABCC13Q9NSE7 274 aa14.38□□□□□ -0.11
TROAP-213ENST00000550709 SEPT11Q9NVA2 429 aaKnown RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 LSM7Q9UK45 103 aaKnown RBP14.38□□□□□ -0.11
TROAP-213ENST00000550709 SIT1Q9Y3P8 196 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms