RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ANKRD18AQ8IVF6 992 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 NRSN1Q8IZ57 195 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 METTL25Q8N6Q8 603 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 TOR1AIP2Q8NFQ8 470 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 PROKR1Q8TCW9 393 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 GCC1Q96CN9 775 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 Q96MF0 132 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 HAPLN3Q96S86 360 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 AIFM2Q9BRQ8 373 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 DDX23Q9BUQ8 820 aaKnown RBP5.67□□□□□ -1.5
LIMA1-205ENST00000550592 MLST8Q9BVC4 326 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 WDR11Q9BZH6 1224 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 PABPC3Q9H361 631 aaKnown RBP5.67□□□□□ -1.5
LIMA1-205ENST00000550592 EPS8L2Q9H6S3 715 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 ITM2CQ9NQX7 267 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 LPAR3Q9UBY5 353 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 SH2B3Q9UQQ2 575 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 BCORL1Q5H9F3 1711 aa5.67□□□□□ -1.5
LIMA1-205ENST00000550592 CD109Q6YHK3 1445 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 VWC2LB2RUY7 222 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 J3KTA2 159 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 M0R3H8 397 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 EXOC5O00471 708 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 FCHO1O14526 889 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 NPHP1O15259 732 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 MPPED1O15442 326 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 IL6RP08887 468 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 ZEB1P37275 1124 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 LIPAP38571 399 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 FOLR3P41439 243 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 MTHFSP49914 203 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 EIF2B5Q13144 721 aaKnown RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 TREML2Q5T2D2 321 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 KLHL17Q6TDP4 642 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 RFX8Q6ZV50 586 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 SLC44A2Q8IWA5 706 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 CCDC117Q8IWD4 279 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 SH3RF3Q8TEJ3 882 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 RFKQ969G6 155 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 GPR20Q99678 358 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 RTKNQ9BST9 563 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 MLXIPQ9HAP2 919 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 FSCN3Q9NQT6 498 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 PRDM8Q9NQV8 689 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 EHD3Q9NZN3 535 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 DKK3Q9UBP4 350 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 NKX1-2Q9UD57 310 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 SRP68Q9UHB9 627 aaKnown RBP5.66□□□□□ -1.5
LIMA1-205ENST00000550592 STEAP1Q9UHE8 339 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 LTBP4Q8N2S1 1624 aa5.66□□□□□ -1.5
LIMA1-205ENST00000550592 MAGI3Q5TCQ9 1506 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 PNMA6EA0A0J9YXQ4 647 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 PEX1O43933 1283 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 TAF5LO75529 589 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 FAM155BO75949 473 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 ACTL6BO94805 426 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 VNN1O95497 513 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 GYS1P13807 737 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 PAX3P23760 479 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 CST5P28325 142 aaPredicted RBP5.65□□□□□ -1.5
LIMA1-205ENST00000550592 AP2B1P63010 937 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 MTAPQ13126 283 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 BMPR2Q13873 1038 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 GRM4Q14833 912 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 NBPF8Q3BBV2 869 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 LSM12Q3MHD2 195 aaKnown RBP5.65□□□□□ -1.5
LIMA1-205ENST00000550592 TRIM60Q495X7 471 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.5
LIMA1-205ENST00000550592 FSTL5Q8N475 847 aaPredicted RBP5.65□□□□□ -1.5
LIMA1-205ENST00000550592 C11orf44Q8N8P7 122 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 SUPT20HQ8NEM7 779 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 SCAMP5Q8TAC9 235 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 WDR60Q8WVS4 1066 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 FBXL20Q96IG2 436 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 FAM167BQ9BTA0 163 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 SAGE1Q9NXZ1 904 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 GABRQQ9UN88 632 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 GTF2A1LQ9UNN4 478 aa5.65□□□□□ -1.5
LIMA1-205ENST00000550592 MAST3O60307 1309 aa5.65□□□□□ -1.51
LIMA1-205ENST00000550592 RIMS1Q86UR5 1692 aaKnown RBP5.65□□□□□ -1.51
LIMA1-205ENST00000550592 CUX1P39880 1505 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 CFAP43Q8NDM7 1665 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 PSMD9O00233 223 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 KIAA0355O15063 1070 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 IRAK2O43187 625 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 TOM1O60784 492 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 NXPH3O95157 252 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 FESP07332 822 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 KLRK1P26718 216 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 TAP1Q03518 808 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 PTPAQ15257 358 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 TAF5Q15542 800 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 TIGD6Q17RP2 521 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 ATPAF1Q5TC12 328 aaPredicted RBP5.64□□□□□ -1.51
LIMA1-205ENST00000550592 RINT1Q6NUQ1 792 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 CYP26C1Q6V0L0 522 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 SPRED1Q7Z699 444 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 MOGAT3Q86VF5 341 aa5.64□□□□□ -1.51
LIMA1-205ENST00000550592 TTC30AQ86WT1 665 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms