RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 USP39Q53GS9 565 aaKnown RBP21■□□□□ 0.95
GCN1-207ENST00000550471 LY6G5CQ5SRR4 150 aa21■□□□□ 0.95
GCN1-207ENST00000550471 FAM160A2Q8N612 972 aaPredicted RBP21■□□□□ 0.95
GCN1-207ENST00000550471 NETO1Q8TDF5 533 aa21■□□□□ 0.95
GCN1-207ENST00000550471 SLC35C1Q96A29 364 aa21■□□□□ 0.95
GCN1-207ENST00000550471 DCLK3Q9C098 648 aa21■□□□□ 0.95
GCN1-207ENST00000550471 POLMQ9NP87 494 aaPredicted RBP21■□□□□ 0.95
GCN1-207ENST00000550471 SEMA4GQ9NTN9 838 aa21■□□□□ 0.95
GCN1-207ENST00000550471 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21■□□□□ 0.95
GCN1-207ENST00000550471 HESX1Q9UBX0 185 aa21■□□□□ 0.95
GCN1-207ENST00000550471 RARGP13631 454 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 TGM1P22735 817 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 RAD23BP54727 409 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 SPEM2Q0P670 501 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 BYSLQ13895 437 aaKnown RBP20.99■□□□□ 0.95
GCN1-207ENST00000550471 RSPO4Q2I0M5 234 aaPredicted RBP20.99■□□□□ 0.95
GCN1-207ENST00000550471 SLC4A11Q8NBS3 891 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 EZH1Q92800 747 aaPredicted RBP20.99■□□□□ 0.95
GCN1-207ENST00000550471 CNOT6LQ96LI5 555 aaKnown RBP20.99■□□□□ 0.95
GCN1-207ENST00000550471 MARK1Q9P0L2 795 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 NAGPAQ9UK23 515 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 MYH10P35580 1976 aa20.99■□□□□ 0.95
GCN1-207ENST00000550471 CYP26A1O43174 497 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 EPN2O95208 641 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CHKAP35790 457 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 BCAT1P54687 386 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 STILQ15468 1287 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CRY1Q16526 586 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 LPAL2Q16609 132 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CCDC40Q4G0X9 1142 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CBWD6Q4V339 395 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 ZNF394Q53GI3 561 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 SGO2Q562F6 1265 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 C2orf27AQ580R0 203 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CBWD3Q5JTY5 395 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 CBWD5Q5RIA9 395 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 C10orf120Q5SQS8 335 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 BBS7Q8IWZ6 715 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 ETFBKMTQ8IXQ9 262 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 TRIML1Q8N9V2 468 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 DDX1Q92499 740 aaKnown RBP20.98■□□□□ 0.95
GCN1-207ENST00000550471 EEF2KMTQ96G04 330 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 HHIPQ96QV1 700 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 STRIP2Q9ULQ0 834 aa20.98■□□□□ 0.95
GCN1-207ENST00000550471 A0A1W2PQH9 124 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 TBC1D3BA6NDS4 549 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 ZBTB24O43167 697 aaPredicted RBP20.97■□□□□ 0.95
GCN1-207ENST00000550471 PAEPP09466 180 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 VDRP11473 427 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 FMO5P49326 533 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 ANO4Q32M45 955 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 RAB41Q5JT25 222 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 NAIF1Q69YI7 327 aaPredicted RBP20.97■□□□□ 0.95
GCN1-207ENST00000550471 SMYD5Q6GMV2 418 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 PRR23CQ6ZRP0 262 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 GPRIN1Q7Z2K8 1008 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 RASSF3Q86WH2 238 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 NT5C1BQ96P26 610 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 OLA1Q9NTK5 396 aaKnown RBP20.97■□□□□ 0.95
GCN1-207ENST00000550471 MAN1B1Q9UKM7 699 aa20.97■□□□□ 0.95
GCN1-207ENST00000550471 XPO1O14980 1071 aaKnown RBP20.96■□□□□ 0.95
GCN1-207ENST00000550471 CACNG3O60359 315 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 SETSIPP0DME0 302 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 PMS1P54277 932 aaKnown RBP20.96■□□□□ 0.95
GCN1-207ENST00000550471 BST2Q10589 180 aaKnown RBP20.96■□□□□ 0.95
GCN1-207ENST00000550471 SRSF5Q13243 272 aaKnown RBP20.96■□□□□ 0.95
GCN1-207ENST00000550471 SCML4Q8N228 414 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 TATDN2Q93075 761 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 JAKMIP2Q96AA8 810 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 PARD6AQ9NPB6 346 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 STARD13Q9Y3M8 1113 aa20.96■□□□□ 0.95
GCN1-207ENST00000550471 CEP250Q9BV73 2442 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 TRIM49BA6NDI0 452 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 TULP3O75386 442 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 ZNF806P0C7X5 589 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 IRF1P10914 325 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 DPP6P42658 865 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 KIR2DL1P43626 348 aaPredicted RBP20.95■□□□□ 0.94
GCN1-207ENST00000550471 SLC6A11P48066 632 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 PXNP49023 591 aaPredicted RBP20.95■□□□□ 0.94
GCN1-207ENST00000550471 SEC13P55735 322 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 MORC3Q14149 939 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 PLK5Q496M5 336 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 PM20D1Q6GTS8 502 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 GRAMD4Q6IC98 578 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 SDE2Q6IQ49 451 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 RSRC2Q7L4I2 434 aaKnown RBP20.95■□□□□ 0.94
GCN1-207ENST00000550471 PIGZQ86VD9 579 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 TERB1Q8NA31 727 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 C12orf50Q8NA57 414 aaPredicted RBP20.95■□□□□ 0.94
GCN1-207ENST00000550471 FAM81BQ96LP2 452 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 BBS2Q9BXC9 721 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 NMUR1Q9HB89 426 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 LRRC4Q9HBW1 653 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 VPS45Q9NRW7 570 aa20.95■□□□□ 0.94
GCN1-207ENST00000550471 NPC1O15118 1278 aa20.94■□□□□ 0.94
GCN1-207ENST00000550471 GREM1O60565 184 aa20.94■□□□□ 0.94
GCN1-207ENST00000550471 TBX18O95935 607 aa20.94■□□□□ 0.94
GCN1-207ENST00000550471 ZBED1O96006 694 aa20.94■□□□□ 0.94
GCN1-207ENST00000550471 PRKCSHP14314 528 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms