RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PRKCEQ02156 737 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 MGAT5Q09328 741 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 SFSWAPQ12872 951 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 SLC5A9Q2M3M2 681 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 RBM44Q6ZP01 1051 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 SP8Q8IXZ3 490 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 ABRAQ8N0Z2 381 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 DLG3Q92796 817 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 PLGRKTQ9HBL7 147 aa16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 AVENQ9NQS1 362 aaPredicted RBP16.29■□□□□ 0.2
RBFOX1-212ENST00000550418 UBDO15205 165 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TRIM13O60858 407 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 SPP2Q13103 211 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 ARHGEF19Q8IW93 802 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 SPON2Q9BUD6 331 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 ACOT9Q9Y305 439 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 ADGRA2Q96PE1 1338 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 EDF1O60869 148 aaKnown RBP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 ABHD2P08910 425 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 VAV1P15498 845 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 SREBF1P36956 1147 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TRAF2Q12933 501 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TTC27Q6P3X3 843 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 DHFR2Q86XF0 187 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TSPAN14Q8NG11 270 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 DGCR14Q96DF8 476 aaKnown RBP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 RABGEF1Q9UJ41 708 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 FGFR2P21802 821 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 CCDC80Q76M96 950 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 RRM2BQ7LG56 351 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 STKLD1Q8NE28 680 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 TRIM62Q9BVG3 475 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 GANQ9H2C0 597 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 LRRC19Q9H756 370 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 USP18Q9UMW8 372 aa16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-212ENST00000550418 NDUFS3O75489 264 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 AVPR1AP37288 418 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 CSTF3Q12996 717 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 NFYCQ13952 458 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 INAQ16352 499 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 TWF2Q6IBS0 349 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 LINC00523Q86TU6 105 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 SCAF8Q9UPN6 1271 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 AK5Q9Y6K8 562 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 GSNP06396 782 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 NR3C2P08235 984 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 BTBD8Q5XKL5 378 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 KCNK18Q7Z418 384 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 PPP1R2P1Q96PQ5 205 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 CHST12Q9NRB3 414 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 TMCO1Q9UM00 188 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 LINC00854A0A1B0GVQ3 168 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 EVPLLA8MZ36 301 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 GARTP22102 1010 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 RAD23AP54725 363 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 ITGADQ13349 1161 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 MPP3Q13368 585 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 MAPK11Q15759 364 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 DCAF6Q58WW2 860 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 CCDC28BQ9BUN5 200 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 TMEM161AQ9NX61 479 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 AFF4Q9UHB7 1163 aaKnown RBP16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 CROTQ9UKG9 612 aa16.27■□□□□ 0.2
RBFOX1-212ENST00000550418 NR5A2O00482 541 aa16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 NME5P56597 212 aa16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 BAATQ14032 418 aaPredicted RBP16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 NRF1Q16656 503 aa16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 LRRC8DQ7L1W4 858 aa16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 NOL6Q9H6R4 1146 aaKnown RBP16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 TAS2R14Q9NYV8 317 aa16.27■□□□□ 0.19
RBFOX1-212ENST00000550418 PEX1O43933 1283 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 IL18RAPO95256 599 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ACADSBP45954 432 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ZNF268Q14587 947 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 KYAT3Q6YP21 454 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 UNC45BQ8IWX7 931 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 DHRSXQ8N5I4 330 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 FITM2Q8N6M3 262 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms