RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ZBED1O96006 694 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 KLKB1P03952 638 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 SETSIPP0DME0 302 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 TCF3P15923 654 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 AOC1P19801 751 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 YWHAGP61981 247 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 PITX1P78337 314 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 UBXN1Q04323 297 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 ARHGAP29Q52LW3 1261 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 C2CD6Q53TS8 623 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 E4F1Q66K89 784 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 YAF2Q8IY57 180 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 PDZD8Q8NEN9 1154 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 PJA1Q8NG27 643 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 DNASE1L2Q92874 299 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 IRF7Q92985 503 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 ERGIC2Q96RQ1 377 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 CPXM1Q96SM3 734 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 MIS12Q9H081 205 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 LTB4R2Q9NPC1 389 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 TRPV5Q9NQA5 729 aa11.78□□□□□ -0.52
RAB5B-208ENST00000550283 TLR8Q9NR97 1041 aaKnown RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 POLR3BQ9NW08 1133 aaPredicted RBP11.78□□□□□ -0.52
RAB5B-208ENST00000550283 KANSL1LA0AUZ9 987 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 E5RJQ4 531 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
RAB5B-208ENST00000550283 ERBB2P04626 1255 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 CYP17A1P05093 508 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 MMEP08473 750 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 CYP11B1P15538 503 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.53
RAB5B-208ENST00000550283 CTHP32929 405 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 PPP3CCP48454 512 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 TUBP50607 506 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 EFEMP1Q12805 493 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 RUNX3Q13761 415 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 GAS6Q14393 721 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 UBXN2BQ14CS0 331 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 BSPRYQ5W0U4 402 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 PKN3Q6P5Z2 889 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 C12orf40Q86WS4 652 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 E2F7Q96AV8 911 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 MFSD1Q9H3U5 465 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 LRRC4Q9HBW1 653 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 DUS2Q9NX74 493 aaKnown RBP11.77□□□□□ -0.53
RAB5B-208ENST00000550283 EHD2Q9NZN4 543 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 SFMBT1Q9UHJ3 866 aa11.77□□□□□ -0.53
RAB5B-208ENST00000550283 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.53
RAB5B-208ENST00000550283 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
RAB5B-208ENST00000550283 F5P12259 2224 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 A0A1B0GTH6 734 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 GOLGA6L3A6NEY3 463 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 FAM170BA6NMN3 283 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 STK25O00506 426 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 TRIM24O15164 1050 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 AP5Z1O43299 807 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 STC2O76061 302 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 HMBSP08397 361 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 GJA4P35212 333 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 SLC6A11P48066 632 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PFKPQ01813 784 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PRKCQQ04759 706 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 TCF15Q12870 199 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PDCLQ13371 301 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 NR1I3Q14994 352 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PON2Q15165 354 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 FKBP15Q5T1M5 1219 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 RHBDF2Q6PJF5 856 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 Q6ZS52 159 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 BAP1Q92560 729 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PCDHB18PQ96TA0 734 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 NAT10Q9H0A0 1025 aaKnown RBP11.76□□□□□ -0.53
RAB5B-208ENST00000550283 ECT2Q9H8V3 914 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 RASAL2Q9UJF2 1139 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
RAB5B-208ENST00000550283 SMTNL1A8MU46 457 aa11.75□□□□□ -0.53
RAB5B-208ENST00000550283 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
RAB5B-208ENST00000550283 CHRNB1P11230 501 aa11.75□□□□□ -0.53
RAB5B-208ENST00000550283 PFKLP17858 780 aa11.75□□□□□ -0.53
RAB5B-208ENST00000550283 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
RAB5B-208ENST00000550283 ATP5C1P36542 298 aaKnown RBP11.75□□□□□ -0.53
RAB5B-208ENST00000550283 PBX1P40424 430 aa11.75□□□□□ -0.53
RAB5B-208ENST00000550283 OPRD1P41143 372 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms