RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CALCOCO1Q9P1Z2 691 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 CGNQ9P2M7 1197 aaKnown RBP16.31■□□□□ 0.2
RAB5C-205ENST00000550013 PCDH15Q96QU1 1955 aa16.31■□□□□ 0.2
RAB5C-205ENST00000550013 PVALEFA0A1B0GWK0 134 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 A0A1W2PQF6 199 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 GREM1O60565 184 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 TLR5O60602 858 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 TBX18O95935 607 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 HOXB2P14652 356 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 MAP3K7CLP57077 242 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 DLG4P78352 724 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 CLDN10P78369 228 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 RPL6Q02878 288 aaKnown RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 SPDYCQ5MJ68 293 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 PEAR1Q5VY43 1037 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 GRAMD4Q6IC98 578 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 SLC23A3Q6PIS1 610 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 TRMT11Q7Z4G4 463 aaKnown RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 SLC2A14Q8TDB8 520 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 ACOX2Q99424 681 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 FAM49BQ9NUQ9 324 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 DNAJC17Q9NVM6 304 aaKnown RBP16.3■□□□□ 0.2
RAB5C-205ENST00000550013 COMMD8Q9NX08 183 aa16.3■□□□□ 0.2
RAB5C-205ENST00000550013 SPAARA0A1B0GVQ0 90 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 AP5Z1O43299 807 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 NTSR1P30989 418 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 NDST1P52848 882 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 AP3M2P53677 418 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 C12orf29Q8N999 325 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 KDF1Q8NAX2 398 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-205ENST00000550013 KCNV2Q8TDN2 545 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 GATA6Q92908 595 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 JAKMIP2Q96AA8 810 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 GTPBP2Q9BX10 602 aaKnown RBP16.29■□□□□ 0.2
RAB5C-205ENST00000550013 KLF16Q9BXK1 252 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-205ENST00000550013 CSNK1G1Q9HCP0 422 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 DMAC2Q9NW81 257 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
RAB5C-205ENST00000550013 PKD1L2Q7Z442 2459 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 WDFY3Q8IZQ1 3526 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 DMXL2Q8TDJ6 3036 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 NEDD8-MDP1E9PL57 170 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 CYP26A1O43174 497 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 KLRC4O43908 158 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 NDUFV2P19404 249 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 ADORA2BP29275 332 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 DPP6P42658 865 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 STK4Q13043 487 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 DUOXA1Q1HG43 343 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-205ENST00000550013 SPOPLQ6IQ16 392 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 TPGS1Q6ZTW0 290 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 HTR3DQ70Z44 454 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 PIP4P1Q86T03 277 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 BBS2Q9BXC9 721 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 FBXO44Q9H4M3 255 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 SLC32A1Q9H598 525 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.22e-6■■■■■ 96.1
RAB5C-205ENST00000550013 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
RAB5C-205ENST00000550013 PCDHA7Q9UN72 937 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 SLC6A14Q9UN76 642 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
RAB5C-205ENST00000550013 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
RAB5C-205ENST00000550013 IGHV1OR15-9A0A0B4J2B8 117 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 MDM4O15151 490 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 HYAL3O43820 417 aaPredicted RBP16.27■□□□□ 0.2
RAB5C-205ENST00000550013 CACNG3O60359 315 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 P4HA1P13674 534 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 TYRP14679 529 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 HOXD12P35452 270 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 ASPAP45381 313 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 ZNF33AQ06730 810 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SEMA3BQ13214 749 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 ZACNQ401N2 412 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 RESP18Q5W5W9 173 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SLC36A4Q6YBV0 504 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SLC41A1Q8IVJ1 513 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 CHPFQ8IZ52 775 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 CRYBG2Q8N1P7 616 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 IPO4Q8TEX9 1081 aaKnown RBP16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 NMUR1Q9HB89 426 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 CAPN10Q9HC96 672 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 CD93Q9NPY3 652 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 FAM13BQ9NYF5 915 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 SERTAD1Q9UHV2 236 aa16.27■□□□□ 0.2
RAB5C-205ENST00000550013 NUDT5Q9UKK9 219 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms