RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 LIMS2Q7Z4I7 341 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 PROSER1Q86XN7 944 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 PHTF2Q8N3S3 785 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 MINDY1Q8N5J2 469 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 OR2I1PQ8NGU4 316 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 ENOX1Q8TC92 643 aaKnown RBP16.47■□□□□ 0.23
TCHP-208ENST00000549550 PCED1BQ96HM7 432 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 HPDLQ96IR7 371 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
TCHP-208ENST00000549550 CELSR3Q9NYQ7 3312 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 PTPRBP23467 1997 aa16.47■□□□□ 0.23
TCHP-208ENST00000549550 MYH10P35580 1976 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.46■□□□□ 0.23
TCHP-208ENST00000549550 F8VP50 259 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 TRIM66O15016 1216 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 GCNT3O95395 438 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 CAPNS1P04632 268 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 CASP5P51878 434 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 TAF10Q12962 218 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 CUL4BQ13620 913 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 LY6G5CQ5SRR4 150 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 UNC13DQ70J99 1090 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 RAB44Q7Z6P3 723 aaPredicted RBP16.46■□□□□ 0.23
TCHP-208ENST00000549550 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 MYCBPAPQ8TBZ2 947 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 CBWD1Q9BRT8 395 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 PCIF1Q9H4Z3 704 aa16.46■□□□□ 0.23
TCHP-208ENST00000549550 PTPRJQ12913 1337 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 BIN1O00499 593 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 KIF20AO95235 890 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
TCHP-208ENST00000549550 CD59P13987 128 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 GAP43P17677 238 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 GABRG2P18507 467 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 ZNF423Q2M1K9 1284 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 MDH1BQ5I0G3 518 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 SLC36A4Q6YBV0 504 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 RABEPKQ7Z6M1 372 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
TCHP-208ENST00000549550 DHX40Q8IX18 779 aaKnown RBP16.45■□□□□ 0.22
TCHP-208ENST00000549550 ZNF513Q8N8E2 541 aaPredicted RBP16.45■□□□□ 0.22
TCHP-208ENST00000549550 NAT16Q8N8M0 369 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 OR5B17Q8NGF7 314 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
TCHP-208ENST00000549550 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 INTS13Q9NVM9 706 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 CALCOCO1Q9P1Z2 691 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 TBC1D14Q9P2M4 693 aa16.45■□□□□ 0.22
TCHP-208ENST00000549550 SMG1Q96Q15 3661 aaKnown RBP16.45■□□□□ 0.22
TCHP-208ENST00000549550 BPTFQ12830 3046 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 TBC1D3BA6NDS4 549 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 ARHGAP33O14559 1287 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 KLRC4O43908 158 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 WARSP23381 471 aaKnown RBP16.44■□□□□ 0.22
TCHP-208ENST00000549550 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 ASIC1P78348 528 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 GAD2Q05329 585 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 IFRD2Q12894 506 aaPredicted RBP16.44■□□□□ 0.22
TCHP-208ENST00000549550 TDRD10Q5VZ19 366 aaKnown RBP16.44■□□□□ 0.22
TCHP-208ENST00000549550 HS2ST1Q7LGA3 356 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 TRMT11Q7Z4G4 463 aaKnown RBP16.44■□□□□ 0.22
TCHP-208ENST00000549550 CCDC65Q8IXS2 484 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 C8orf48Q96LL4 319 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 CAMK1GQ96NX5 476 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 MMS19Q96T76 1030 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 FGFBP2Q9BYJ0 223 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 OLFML3Q9NRN5 406 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 TMEM30AQ9NV96 361 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 DNAAF2Q9NVR5 837 aaKnown RBP16.44■□□□□ 0.22
TCHP-208ENST00000549550 GPSM3Q9Y4H4 160 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
TCHP-208ENST00000549550 IGHV1OR15-9A0A0B4J2B8 117 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 E2F8A0AVK6 867 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 TULP3O75386 442 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 TNNC2P02585 160 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 HOXB2P14652 356 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 BMP6P22004 513 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 WASP42768 502 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 HNRNPDQ14103 355 aaKnown RBP16.43■□□□□ 0.22
TCHP-208ENST00000549550 C10orf76Q5T2E6 689 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 BTBD8Q5XKL5 378 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 C19orf48Q6RUI8 117 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 SLC41A1Q8IVJ1 513 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 ETFBKMTQ8IXQ9 262 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 GPD1LQ8N335 351 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 KCNV2Q8TDN2 545 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 DHTKD1Q96HY7 919 aaPredicted RBP16.43■□□□□ 0.22
TCHP-208ENST00000549550 ZFRQ96KR1 1074 aaKnown RBP16.43■□□□□ 0.22
TCHP-208ENST00000549550 HSPA12BQ96MM6 686 aa16.43■□□□□ 0.22
TCHP-208ENST00000549550 MRPL45Q9BRJ2 306 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms