RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TLE3Q04726 772 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 RTP5Q14D33 572 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 SF3A1Q15459 793 aaKnown RBP9.48□□□□□ -0.89
UBE2N-203ENST00000549490 MAPRE1Q15691 268 aaKnown RBP9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TMEM119Q4V9L6 283 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TAF1BQ53T94 588 aaPredicted RBP9.48□□□□□ -0.89
UBE2N-203ENST00000549490 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 LIMS2Q7Z4I7 341 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 GPBP1Q86WP2 473 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 FBXO18Q8NFZ0 1043 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 KBTBD7Q8WVZ9 684 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 POMGNT1Q8WZA1 660 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 BAP1Q92560 729 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 SIX4Q9UIU6 781 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 ITGA11Q9UKX5 1188 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 STON1Q9Y6Q2 735 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 ANK1P16157 1881 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 PTPN13Q12923 2485 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 ANAPC1Q9H1A4 1944 aa9.48□□□□□ -0.89
UBE2N-203ENST00000549490 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CEP192Q8TEP8 1941 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 NEDD8-MDP1E9PL57 170 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 PCDHGA12O60330 932 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 KRT19P08727 400 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 IRF1P10914 325 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 TYRP14679 529 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 OXTRP30559 389 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 AFF3P51826 1226 aaKnown RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CXADRP78310 365 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 RBP5P82980 135 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 TARDBPQ13148 414 aaKnown RBP eCLIP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 FMNL3Q8IVF7 1028 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 FAM181AQ8N9Y4 354 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 ZSWIM2Q8NEG5 633 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 ENGASEQ8NFI3 743 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 MYCBPAPQ8TBZ2 947 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CACTINQ8WUQ7 758 aaKnown RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 FGF11Q92914 225 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 XPO6Q96QU8 1125 aaKnown RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 HNRNPABQ99729 332 aaKnown RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 FAM213AQ9BRX8 229 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 SEMA4CQ9C0C4 833 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 ZHX3Q9H4I2 956 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CCSER2Q9H7U1 834 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 FTSJ1Q9UET6 329 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 CHORDC1Q9UHD1 332 aaPredicted RBP9.47□□□□□ -0.89
UBE2N-203ENST00000549490 ANKRD6Q9Y2G4 727 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 PCDHGA1Q9Y5H4 931 aa9.47□□□□□ -0.89
UBE2N-203ENST00000549490 MYOFQ9NZM1 2061 aa9.46□□□□□ -0.89
UBE2N-203ENST00000549490 B8ZZF3 427 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 H0Y8X5 98 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 GREM1O60565 184 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 WISP1O95388 367 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 IGLV3-19P01714 112 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 WARSP23381 471 aaKnown RBP9.46□□□□□ -0.9
UBE2N-203ENST00000549490 YWHAQP27348 245 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 ABCD1P33897 745 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 HNF1BP35680 557 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 CCT8P50990 548 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 IL9RQ01113 521 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 SRSF1Q07955 248 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBE2N-203ENST00000549490 CCDC173Q0VFZ6 552 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 DHX8Q14562 1220 aaKnown RBP9.46□□□□□ -0.9
UBE2N-203ENST00000549490 STARD3Q14849 445 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 POSTNQ15063 836 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 KCNT1Q5JUK3 1230 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 HECTD3Q5T447 861 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 LAYNQ6UX15 382 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 TPGS1Q6ZTW0 290 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 USP49Q70CQ1 688 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 HTR3DQ70Z44 454 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 TMPRSS6Q8IU80 811 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 PDZD8Q8NEN9 1154 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 IGSF8Q969P0 613 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 FBXO32Q969P5 355 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 SIPA1Q96FS4 1042 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 WBP1Q96G27 269 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 TMEM176AQ96HP8 235 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 CDK5RAP3Q96JB5 506 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 BBS2Q9BXC9 721 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 TM9SF3Q9HD45 589 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
UBE2N-203ENST00000549490 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 WDR35Q9P2L0 1181 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 NME7Q9Y5B8 376 aa9.46□□□□□ -0.9
UBE2N-203ENST00000549490 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms