RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 INTS6LQ5JSJ4 861 aaKnown RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 RILPQ96NA2 401 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 BCORQ6W2J9 1755 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 KIF3CO14782 793 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 FGF10O15520 208 aaPredicted RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 RGS20O76081 388 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 TRUB2O95900 331 aaKnown RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 ACRP10323 421 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 NR2C2P49116 596 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 WDR59Q6PJI9 974 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 LCLAT1Q6UWP7 414 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 ZBED8Q8IZ13 594 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 BHMTQ93088 406 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 GPR63Q9BZJ6 419 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 CNOT10Q9H9A5 744 aaKnown RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 CACYBPQ9HB71 228 aaKnown RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
VDR-206ENST00000549336 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
VDR-206ENST00000549336 TTI1O43156 1089 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 CILPO75339 1184 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 PPP3CCP48454 512 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 CLCNKBP51801 687 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
VDR-206ENST00000549336 KCNMA1Q12791 1236 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 FUBP3Q96I24 572 aaKnown RBP eCLIP12.09□□□□□ -0.47
VDR-206ENST00000549336 KCNF1Q9H3M0 494 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
VDR-206ENST00000549336 PKP3Q9Y446 797 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 ADAMTS3O15072 1205 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 LY75O60449 1722 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 GPC4O75487 556 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 FGFR1P11362 822 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 FRA10AC1Q70Z53 315 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 PIK3R5Q8WYR1 880 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 DNAJC17Q9NVM6 304 aaKnown RBP12.09□□□□□ -0.47
VDR-206ENST00000549336 RARGP13631 454 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 TUBP50607 506 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 RHOAP61586 193 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 PPP2R2DQ66LE6 453 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 MYLK4Q86YV6 388 aaPredicted RBP12.09□□□□□ -0.47
VDR-206ENST00000549336 SLC9A7Q96T83 725 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 CYTH2Q99418 400 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 NAT9Q9BTE0 207 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 GOLPH3Q9H4A6 298 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 CHEK2O96017 543 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 PMS2P54278 862 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
VDR-206ENST00000549336 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 FGFBP2Q9BYJ0 223 aa12.09□□□□□ -0.47
VDR-206ENST00000549336 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 OR1E1P30953 314 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 HNRNPH3P31942 346 aaKnown RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 AIF1P55008 147 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 PPM1NQ8N819 430 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 IPMKQ8NFU5 416 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 PCYT2Q99447 389 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 MRPL45Q9BRJ2 306 aaKnown RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 PJA2O43164 708 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 ASMTLO95671 621 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 KCNE1P15382 129 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 WARSP23381 471 aaKnown RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 DUSP4Q13115 394 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 MCUQ8NE86 351 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 C2orf49Q9BVC5 232 aaPredicted RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 CLUHO75153 1309 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 POLBP06746 335 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 CYP2F1P24903 491 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 CST5P28325 142 aaPredicted RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 COILP38432 576 aaPredicted RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 MRPS5P82675 430 aaKnown RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 STAT4Q14765 748 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 CCDC6Q16204 474 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
VDR-206ENST00000549336 TMCO4Q5TGY1 634 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 SMYD5Q6GMV2 418 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 LGI2Q8N0V4 545 aa12.08□□□□□ -0.48
VDR-206ENST00000549336 IRGQQ8WZA9 623 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms