RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CORO1BQ9BR76 489 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 NACA2Q9H009 215 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 WDR6Q9NNW5 1121 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.772e-9■■■□□ 16.3
SMARCD1-206ENST00000549274 IP6K2Q9UHH9 426 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 CYTH4Q9UIA0 394 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 MRPS23Q9Y3D9 190 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 OBSL1O75147 1896 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 C2orf16Q68DN1 1984 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 TRAV19A0A0A6YYK7 116 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 MYO1FO00160 1098 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 TLR5O60602 858 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 RFPL2O75678 378 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 RNF8O76064 485 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 MTA2O94776 668 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 F11P03951 625 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC2A3P11169 496 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 MYL4P12829 197 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 FSHRP23945 695 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 WEE1P30291 646 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SDC4P31431 198 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ATP5C1P36542 298 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 MATKP42679 507 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 COG7P83436 770 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SMAD4Q13485 552 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 PIGHQ14442 188 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ARHGAP29Q52LW3 1261 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 MSANTD2Q6P1R3 559 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 TMC5Q6UXY8 1006 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 GPRIN1Q7Z2K8 1008 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 TMC8Q8IU68 726 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SYCE1Q8N0S2 351 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 RNF10Q8N5U6 811 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 OLIG1Q8TAK6 271 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 FEZF2Q8TBJ5 459 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF564Q8TBZ8 553 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF707Q96C28 371 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 GUCD1Q96NT3 240 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 THAP2Q9H0W7 228 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ATXN3LQ9H3M9 355 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 TASP1Q9H6P5 420 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 UBE2ZQ9H832 354 aaPredicted RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 KIF9Q9HAQ2 790 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 TAS2R14Q9NYV8 317 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 GDE1Q9NZC3 331 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 GMIPQ9P107 970 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 CTTNBP2NLQ9P2B4 639 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC12A6Q9UHW9 1150 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 DNMT3LQ9UJW3 386 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 HBS1LQ9Y450 684 aaKnown RBP10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
SMARCD1-206ENST00000549274 NUP210Q8TEM1 1887 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 YJEFN3A6XGL0 299 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 E7ENQ6 273 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 GOLGA8SH3BPF8 625 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 DPYSL4O14531 572 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 TBX10O75333 385 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ABL1P00519 1130 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 NCAM1P13591 858 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 RARGP13631 454 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 PDGFRAP16234 1089 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 GPD1P21695 349 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 RRM1P23921 792 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 MAN1A1P33908 653 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 AVPR1AP37288 418 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC1A1P43005 524 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 PTPN9P43378 593 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF143P52747 638 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 AIF1P55008 147 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 MAMLD1Q13495 774 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC25A52Q3SY17 297 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SDHAF4Q5VUM1 108 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SYCE2Q6PIF2 218 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 Q7L0L9 218 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 STRADAQ7RTN6 431 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 GRASPQ7Z6J2 395 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 GPR152Q8TDT2 470 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ACSF2Q96CM8 615 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 PGAP3Q96FM1 320 aaPredicted RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 MSLNLQ96KJ4 702 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 MCEEQ96PE7 176 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ALS2CR12Q96Q35 445 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 CNPY3Q9BT09 278 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 NUP85Q9BW27 656 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 LRRC3Q9BY71 257 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 DCLK3Q9C098 648 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SMOC2Q9H3U7 446 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 SLITRK6Q9H5Y7 841 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms