RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MAPRE1Q15691 268 aaKnown RBP12.97□□□□□ -0.33
DDX54-206ENST00000549271 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 FAM26FQ5R3K3 315 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 VSTM1Q6UX27 236 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 DBX2Q6ZNG2 339 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 C4orf50Q6ZRC1 276 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 STXBP4Q6ZWJ1 553 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
DDX54-206ENST00000549271 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
DDX54-206ENST00000549271 KBTBD7Q8WVZ9 684 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 PAGE5Q96GU1 130 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 ANKRD36BP1Q96IX9 119 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 KIAA1586Q9HCI6 787 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 CD248Q9HCU0 757 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 CABIN1Q9Y6J0 2220 aa12.97□□□□□ -0.33
DDX54-206ENST00000549271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.96□□□□□ -0.33
DDX54-206ENST00000549271 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 ZNF233A6NK53 670 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 E9PAM4 449 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 TGFB1I1O43294 461 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 ZNF217O75362 1048 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 KRT19P08727 400 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 PDE6CP51160 858 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 RHBDF2Q6PJF5 856 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 RGL4Q8IZJ4 473 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.33
DDX54-206ENST00000549271 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 FAM84AQ96KN4 292 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 IL21RQ9HBE5 538 aa12.96□□□□□ -0.33
DDX54-206ENST00000549271 KNL1Q8NG31 2342 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 PTPRJQ12913 1337 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 A0A1W2PQF6 199 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 HCRTO43612 131 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 TNNC2P02585 160 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 GNSP15586 552 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 KDSRQ06136 332 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 BECN1Q14457 450 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 CCDC142Q17RM4 750 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 SYCP2LQ5T4T6 812 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 TRMT11Q7Z4G4 463 aaKnown RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 CBWD2Q8IUF1 395 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 LURAP1LQ8IV03 231 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 WDR49Q8IV35 697 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 CEP57L1Q8IYX8 460 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 CDC6Q99741 560 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 SYT15Q9BQS2 421 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 TTLL2Q9BWV7 592 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 SLC39A2Q9NP94 309 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 EHD2Q9NZN4 543 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 MAGEC2Q9UBF1 373 aaPredicted RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 HCN2Q9UL51 889 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 CYP8B1Q9UNU6 501 aa12.95□□□□□ -0.34
DDX54-206ENST00000549271 R3HCC1Q9Y3T6 440 aaKnown RBP12.95□□□□□ -0.34
DDX54-206ENST00000549271 TMEM131Q92545 1883 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 FAM149AA5PLN7 773 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
DDX54-206ENST00000549271 CAPN9O14815 690 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 ATP2C2O75185 946 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 TACC1O75410 805 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 HOXB2P14652 356 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 NDUFV2P19404 249 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 LMO2P25791 158 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 MAOBP27338 520 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
DDX54-206ENST00000549271 PPP3CCP48454 512 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 NDUFA8P51970 172 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
DDX54-206ENST00000549271 SLC7A9P82251 487 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 PCSK4Q6UW60 755 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 ETFBKMTQ8IXQ9 262 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 MYCBPAPQ8TBZ2 947 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 DNASE2BQ8WZ79 361 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 FOXJ1Q92949 421 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 SCAND2PQ9GZW5 306 aaPredicted RBP12.94□□□□□ -0.34
DDX54-206ENST00000549271 GAREM1Q9H706 876 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 CD93Q9NPY3 652 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 CRTAC1Q9NQ79 661 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
DDX54-206ENST00000549271 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms