RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 SKILP12757 684 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 CHRNB2P17787 502 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 RPL34P49207 117 aaKnown RBP10.07□□□□□ -0.8
RAB5B-205ENST00000549034 TUBP50607 506 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 DAOAP59103 153 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 SLC7A9P82251 487 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 PDCLQ13371 301 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 ZNF268Q14587 947 aaPredicted RBP10.07□□□□□ -0.8
RAB5B-205ENST00000549034 FMNL3Q8IVF7 1028 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 UBALD2Q8IYN6 164 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 SCML4Q8N228 414 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 EPS8L1Q8TE68 723 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 SH3RF2Q8TEC5 729 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 DEPDC1BQ8WUY9 529 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 EDEM1Q92611 657 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 BRD9Q9H8M2 597 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 KIF9Q9HAQ2 790 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 ABCC13Q9NSE7 274 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
RAB5B-205ENST00000549034 CLIC5Q9NZA1 410 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 AIPL1Q9NZN9 384 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 NOCTQ9UK39 431 aaKnown RBP10.07□□□□□ -0.8
RAB5B-205ENST00000549034 FBXL21Q9UKT6 434 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 ARHGAP26Q9UNA1 814 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 LUC7L2Q9Y383 392 aaKnown RBP10.07□□□□□ -0.8
RAB5B-205ENST00000549034 CPQQ9Y646 472 aa10.07□□□□□ -0.8
RAB5B-205ENST00000549034 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CAPN9O14815 690 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 MDM4O15151 490 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 PAPSS1O43252 624 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 OLFM2O95897 454 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 LTFP02788 710 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ERBB2P04626 1255 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 HMBSP08397 361 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 TPM1P09493 284 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 IRF1P10914 325 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SRFP11831 508 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CASP14P31944 242 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CDH5P33151 784 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ZBED6P86452 979 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ZXDBP98169 803 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 FMO1Q01740 532 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 KLHL30Q0D2K2 578 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 EFEMP1Q12805 493 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 EFHC1Q5JVL4 640 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 NAA35Q5VZE5 725 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 MIB1Q86YT6 1006 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 VSTM4Q8IW00 320 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ZNF276Q8N554 614 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SLC30A5Q8TAD4 765 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CSGALNACT1Q8TDX6 532 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 IPO4Q8TEX9 1081 aaKnown RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 IRF7Q92985 503 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 C18orf8Q96DM3 657 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 IQCDQ96DY2 449 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ZFYVE19Q96K21 471 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CPXM1Q96SM3 734 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 PCDHB18PQ96TA0 734 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 KLF16Q9BXK1 252 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 TTYH3Q9C0H2 523 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 NUCKS1Q9H1E3 243 aaKnown RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 LINC00597Q9H2U6 94 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 HAUS4Q9H6D7 363 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
RAB5B-205ENST00000549034 CFAP97Q9P2B7 532 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SFMBT1Q9UHJ3 866 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 RASAL2Q9UJF2 1139 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 DUSP12Q9UNI6 340 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SH3BP1Q9Y3L3 701 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 ITIH6Q6UXX5 1313 aa10.06□□□□□ -0.8
RAB5B-205ENST00000549034 SLC12A8A0AV02 714 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 CHADO15335 359 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 LSM8O95777 96 aaKnown RBP10.05□□□□□ -0.8
RAB5B-205ENST00000549034 CYP1A1P04798 512 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-205ENST00000549034 NCAM1P13591 858 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 IFNAR2P48551 515 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 RNASE9P60153 205 aaKnown RBP10.05□□□□□ -0.8
RAB5B-205ENST00000549034 YWHAZP63104 245 aaKnown RBP10.05□□□□□ -0.8
RAB5B-205ENST00000549034 COG7P83436 770 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 PFKPQ01813 784 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 SLC6A3Q01959 620 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 GOLGA8FQ08AF8 430 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 SIGLEC14Q08ET2 396 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 GOLGA8DPQ0D2H9 430 aa10.05□□□□□ -0.8
RAB5B-205ENST00000549034 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms