RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 DCAF12L1Q5VU92 463 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 ARFGAP1Q8N6T3 406 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 ZNF548Q8NEK5 533 aaPredicted RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 TRIM5Q9C035 493 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 ZMAT3Q9HA38 289 aaKnown RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 SMURF2Q9HAU4 748 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 XPNPEP3Q9NQH7 507 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 HS3ST3B1Q9Y662 390 aa4.89□□□□□ -1.63
CNOT2-216ENST00000548939 RIMS1Q86UR5 1692 aaKnown RBP4.89□□□□□ -1.63
CNOT2-216ENST00000548939 KIAA0586Q9BVV6 1533 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 FAM90A8PA6NJQ4 464 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 FAM90A13PP0C7W8 464 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 FAM90A24PP0C7X0 464 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 HTR6P50406 440 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 TIRAPP58753 221 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
CNOT2-216ENST00000548939 SEMA3AQ14563 771 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 INSCQ1MX18 579 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 ZDHHC24Q6UX98 284 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 SMRP1Q8NCR6 262 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 PPP1R9BQ96SB3 815 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 ZNF518BQ9C0D4 1074 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
CNOT2-216ENST00000548939 CD109Q6YHK3 1445 aa4.88□□□□□ -1.63
CNOT2-216ENST00000548939 MED1Q15648 1581 aaPredicted RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 B4DGG1 531 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 PHGDHO43175 533 aaKnown RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 TULP3O75386 442 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 HSPA6P17066 643 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 ATF7P17544 494 aaPredicted RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 CFHR3Q02985 330 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 SLC9C1Q4G0N8 1177 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 PPP1R35Q8TAP8 253 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 ZCRB1Q8TBF4 217 aaKnown RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 SPSB4Q96A44 273 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 ZFYVE19Q96K21 471 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 ZBTB45Q96K62 511 aaPredicted RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 FAM234AQ9H0X4 552 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 NMRK2Q9NPI5 230 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 TRIM36Q9NQ86 728 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 A1CFQ9NQ94 594 aaKnown RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 DNMT3BQ9UBC3 853 aaKnown RBP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
CNOT2-216ENST00000548939 WRNQ14191 1432 aaPredicted RBP eCLIP4.87□□□□□ -1.63
CNOT2-216ENST00000548939 BCORL1Q5H9F3 1711 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 CLIC1O00299 241 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 CD3EAPO15446 510 aaKnown RBP4.86□□□□□ -1.63
CNOT2-216ENST00000548939 TOMM40O96008 361 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 EN2P19622 333 aaPredicted RBP4.86□□□□□ -1.63
CNOT2-216ENST00000548939 YPEL5P62699 121 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 TIAL1Q01085 375 aaKnown RBP eCLIP4.86□□□□□ -1.63
CNOT2-216ENST00000548939 ERV3-1Q14264 604 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 LVRNQ6Q4G3 990 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 KCTD20Q7Z5Y7 419 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 NGDNQ8NEJ9 315 aaKnown RBP4.86□□□□□ -1.63
CNOT2-216ENST00000548939 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 WDYHV1Q96HA8 205 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 LRGUKQ96M69 825 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 HIPK2Q9H2X6 1198 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 PNMA8BQ9ULN7 279 aaPredicted RBP4.86□□□□□ -1.63
CNOT2-216ENST00000548939 TNIKQ9UKE5 1360 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 YEATS2Q9ULM3 1422 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 ERICH3Q5RHP9 1530 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 FER1L4A9Z1Z3 1794 aa4.86□□□□□ -1.63
CNOT2-216ENST00000548939 LOC102723971A0A1B0GUV8 181 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 EXOC5O00471 708 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 MARCH6O60337 910 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 TACR3P29371 465 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 SLC7A1P30825 629 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 HSPA1LP34931 641 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 HSF1Q00613 529 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 SLC14A1Q13336 389 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 STIM1Q13586 685 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 NPY5RQ15761 445 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 C12orf76Q8N812 135 aaPredicted RBP4.85□□□□□ -1.63
CNOT2-216ENST00000548939 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 MAML1Q92585 1016 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 ACO2Q99798 780 aaKnown RBP4.85□□□□□ -1.63
CNOT2-216ENST00000548939 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.85□□□□□ -1.63
CNOT2-216ENST00000548939 UACAQ9BZF9 1416 aa4.85□□□□□ -1.63
CNOT2-216ENST00000548939 WDR7Q9Y4E6 1490 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 H7C4K7 107 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 CCP110O43303 1012 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 SMAD6O43541 496 aaKnown RBP4.84□□□□□ -1.63
CNOT2-216ENST00000548939 HGFP14210 728 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 CPA2P48052 419 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 PTDSS1P48651 473 aaKnown RBP4.84□□□□□ -1.63
CNOT2-216ENST00000548939 GATMP50440 423 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 PGDP52209 483 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 AGFG1P52594 562 aaKnown RBP4.84□□□□□ -1.63
CNOT2-216ENST00000548939 ITGA8P53708 1063 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 MTX1Q13505 466 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 ANO6Q4KMQ2 910 aa4.84□□□□□ -1.63
CNOT2-216ENST00000548939 DAB2IPQ5VWQ8 1189 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms