RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ITGA9Q13797 1035 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 VWA5B1Q5TIE3 1220 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 GALNT4Q8N4A0 578 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 TEX9Q8N6V9 391 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 FBXO41Q8TF61 875 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 SHOC2Q9UQ13 582 aa14.7□□□□□ -0.06
CACNB3-209ENST00000548860 DFFAO00273 331 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 ACO1P21399 889 aaKnown RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 KCNA3P22001 575 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MGAT5Q09328 741 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 PDK4Q16654 411 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 CYP1B1Q16678 543 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 CCDC142Q17RM4 750 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 KHDC1Q4VXA5 237 aaKnown RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 SWT1Q5T5J6 900 aaKnown RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 METTL7BQ6UX53 244 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 RAB3IL1Q8TBN0 382 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 SLC10A4Q96EP9 437 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 SMARCAD1Q9H4L7 1026 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 TLK1Q9UKI8 766 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 M0QYT0 321 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MGRN1O60291 552 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 PPM1JQ5JR12 505 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 PPP1R26Q5T8A7 1209 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 CATSPERGQ6ZRH7 1159 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 CMC1Q7Z7K0 106 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 C1orf127Q8N9H9 656 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 PPWD1Q96BP3 646 aaKnown RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 GTSE1Q9NYZ3 720 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MCM8Q9UJA3 840 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 SLC39A10Q9ULF5 831 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 CXorf49A8MYA2 514 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 PLSCR1O15162 318 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 HUS1O60921 280 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 FARP2O94887 1054 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 GPX6P59796 221 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 FOXD4Q12950 439 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MMEL1Q495T6 779 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 LACTB2Q53H82 288 aaPredicted RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 RNASEH2BQ5TBB1 312 aaKnown RBP14.69□□□□□ -0.06
CACNB3-209ENST00000548860 MIEF2Q96C03 454 aa14.69□□□□□ -0.06
CACNB3-209ENST00000548860 DDX60LQ5H9U9 1706 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 ALOX15BO15296 676 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 ATP5HO75947 161 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 LYPLA2O95372 231 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 MYL3P08590 195 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 GNL1P36915 607 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 IREB2P48200 963 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 TRIP10Q15642 601 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 RDM1Q8NG50 284 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 CNPY3Q9BT09 278 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 SNRNP25Q9BV90 132 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 PTPRHQ9HD43 1115 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 PAK5Q9P286 719 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 LUC7L3O95232 432 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 MCL1Q07820 350 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 KLC1Q07866 573 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 BZW1Q7L1Q6 419 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 SLC26A11Q86WA9 606 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 SCN4BQ8IWT1 228 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 TMA16Q96EY4 203 aaKnown RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 TXLNGYQ9BZA5 131 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 NDE1Q9NXR1 346 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 AP4E1Q9UPM8 1137 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 ASMTLO95671 621 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 PTPN4P29074 926 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 N4BP2L1Q5TBK1 243 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 TTC39BQ5VTQ0 682 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 MPP5Q8N3R9 675 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 LENG1Q96BZ8 264 aaPredicted RBP14.68□□□□□ -0.06
CACNB3-209ENST00000548860 ZNF358Q9NW07 568 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 MFHAS1Q9Y4C4 1052 aa14.68□□□□□ -0.06
CACNB3-209ENST00000548860 PPEF2O14830 753 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 CA8P35219 290 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 NME5P56597 212 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 TAP1Q03518 808 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 CLNKQ7Z7G1 428 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 SLC2A14Q8TDB8 520 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 USP13Q92995 863 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 TRIM4Q9C037 500 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 DHX33Q9H6R0 707 aaKnown RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 CYP4F12Q9HCS2 524 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 ERAP1Q9NZ08 941 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 RABGEF1Q9UJ41 708 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 GRID1Q9ULK0 1009 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 NOD1Q9Y239 953 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 WASF2Q9Y6W5 498 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 SIGLEC16A6NMB1 481 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 DNAJC6O75061 913 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 GSTA2P09210 222 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 GOT1P17174 413 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 PDCD2Q16342 344 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 THEMIS2Q5TEJ8 643 aa14.67□□□□□ -0.06
CACNB3-209ENST00000548860 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 SCG3Q8WXD2 468 aaKnown RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 MRPL45Q9BRJ2 306 aaKnown RBP14.67□□□□□ -0.06
CACNB3-209ENST00000548860 CAB39LQ9H9S4 337 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms