RNA–Protein interactions for RNA: ENST00000547818.5

CACNB3-207, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 904 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-207ENST00000547818 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
CACNB3-207ENST00000547818 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
CACNB3-207ENST00000547818 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
CACNB3-207ENST00000547818 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 PIK3R2O00459 728 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 GRAP2O75791 330 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 BEST1O76090 585 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 EFEMP2O95967 443 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 COL9A1P20849 921 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 GRIK1P39086 918 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 PSEN1P49768 467 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 SULT1E1P49888 294 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 HDAC4P56524 1084 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 WDR5P61964 334 aaKnown RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 GPS2Q13227 327 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 MTA1Q13330 715 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 KRT81Q14533 505 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 DPYSL2Q16555 572 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 ARL13BQ3SXY8 428 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 BEND6Q5SZJ8 279 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 AADACL2Q6P093 401 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 HERC2P3Q9BVR0 1158 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 VIPAS39Q9H9C1 493 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNB3-207ENST00000547818 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 NCOR1O75376 2440 aa13.11□□□□□ -0.31
CACNB3-207ENST00000547818 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 C3orf70A6NLC5 250 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TTI1O43156 1089 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 APOC2P02655 101 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CSF2RAP15509 400 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TGM2P21980 687 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 IL1R2P27930 398 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 ARSEP51690 589 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CDH6P55285 790 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 ATP11AP98196 1134 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CAV1Q03135 178 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 SCAPQ12770 1279 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TAF5Q15542 800 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CDO1Q16878 200 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 SLC8B1Q6J4K2 584 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 SCYL2Q6P3W7 929 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 BZW1Q7L1Q6 419 aaKnown RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 GPR62Q9BZJ7 368 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 MTIF3Q9H2K0 278 aaKnown RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CWH43Q9H720 699 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 ABI2Q9NYB9 513 aaPredicted RBP13.1□□□□□ -0.31
CACNB3-207ENST00000547818 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
CACNB3-207ENST00000547818 CFAP69A5D8W1 941 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 F8W810 466 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 TNFRSF10BO14763 440 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 UPP2O95045 317 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 SOD2P04179 222 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 ITGAVP06756 1048 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 CPB1P15086 417 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 TCF4P15884 667 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 HTR7P34969 479 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 ARL4AP40617 200 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 PTGIRP43119 386 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 TUFMP49411 452 aaKnown RBP13.09□□□□□ -0.31
CACNB3-207ENST00000547818 GATMP50440 423 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 SLC5A3P53794 718 aa13.09□□□□□ -0.31
CACNB3-207ENST00000547818 SLC7A5Q01650 507 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms