RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 UCHL3P15374 230 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 KLK7P49862 253 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 ZNF165P49910 485 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 YWHAGP61981 247 aaKnown RBP eCLIP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 FZD5Q13467 585 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 RAPGEF1Q13905 1077 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 DRAP1Q14919 205 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 C10orf120Q5SQS8 335 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 APTXQ7Z2E3 356 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 FAM71AQ8IYT1 594 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 SIX6OS1Q8N1H7 587 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 CPA6Q8N4T0 437 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 DTWD2Q8NBA8 298 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 WBP2Q969T9 261 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 HSFY1Q96LI6 401 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 NAA15Q9BXJ9 866 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 PLCB1Q9NQ66 1216 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 CNGB3Q9NQW8 809 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 DNMT3LQ9UJW3 386 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 ARIH1Q9Y4X5 557 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 MUC6Q6W4X9 2439 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 E2F8A0AVK6 867 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 SMTNL1A8MU46 457 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 LGALS16A8MUM7 142 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 PIK3R2O00459 728 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 NCAM2O15394 837 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 CLCN1P35523 988 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 PTK2Q05397 1052 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 MEA1Q16626 185 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 SKOR2Q2VWA4 1001 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 TADA2BQ86TJ2 420 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 ADGRG2Q8IZP9 1017 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 SCML4Q8N228 414 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 CLDN23Q96B33 292 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 CHFRQ96EP1 664 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 CDK5RAP1Q96SZ6 601 aaKnown RBP19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 SH3BP1Q9Y3L3 701 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 MIA3Q5JRA6 1907 aa19.66■□□□□ 0.74
PRPF40B-206ENST00000547764 YJEFN3A6XGL0 299 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 E7ENQ6 273 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 SLC9A3R1O14745 358 aaPredicted RBP19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 IRF1P10914 325 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 GJA4P35212 333 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 DAOAP59103 153 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 TCF15Q12870 199 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 PON2Q15165 354 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 SLC47A2Q86VL8 602 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 STK33Q9BYT3 514 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 GANQ9H2C0 597 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 TBC1D14Q9P2M4 693 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 SIK3Q9Y2K2 1263 aa19.65■□□□□ 0.74
PRPF40B-206ENST00000547764 GREM1O60565 184 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 NFATC1O95644 943 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 RPL34P49207 117 aaKnown RBP19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 AMPD2Q01433 879 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 UBXN1Q04323 297 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 EFEMP1Q12805 493 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 NR1H3Q13133 447 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 IQCB1Q15051 598 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 SYCP1Q15431 976 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 BSPRYQ5W0U4 402 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 BTBD8Q5XKL5 378 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 RSRC2Q7L4I2 434 aaKnown RBP19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 MIB1Q86YT6 1006 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 CLEC4CQ8WTT0 213 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 STK32AQ8WU08 396 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 LMAN1LQ9HAT1 526 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 ST7Q9NRC1 585 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 FAM207AQ9NSI2 230 aaPredicted RBP19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 CYTH4Q9UIA0 394 aa19.64■□□□□ 0.73
PRPF40B-206ENST00000547764 EPHB6O15197 1021 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 CHRNB1P11230 501 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 MAGEA9P43362 315 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 RPS9P46781 194 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 BPIFB4P59827 614 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 GOLGA8FQ08AF8 430 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 GOLGA8DPQ0D2H9 430 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 DHCR24Q15392 516 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 ZSCAN23Q3MJ62 389 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 HTR3DQ70Z44 454 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 BBS7Q8IWZ6 715 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 IRGQQ8WZA9 623 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 EDEM1Q92611 657 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 SLC4A5Q9BY07 1137 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 MIS12Q9H081 205 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 RASAL2Q9UJF2 1139 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 PCDHGC3Q9UN70 934 aa19.63■□□□□ 0.73
PRPF40B-206ENST00000547764 F8VZ95 297 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 TRDMT1O14717 391 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 FBXO21O94952 628 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 CYP17A1P05093 508 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 KRT9P35527 623 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 ACADSBP45954 432 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 PTPN5P54829 565 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 POLR2FP61218 127 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 NAIF1Q69YI7 327 aaPredicted RBP19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 RHBDF2Q6PJF5 856 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 PASD1Q8IV76 773 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 SCUBE3Q8IX30 993 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 WDTC1Q8N5D0 677 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms