RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 FAM118BQ9BPY3 351 aa17.31■□□□□ 0.36
CHMP1A-204ENST00000547687 EPB41L4BQ9H329 900 aa17.31■□□□□ 0.36
CHMP1A-204ENST00000547687 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
CHMP1A-204ENST00000547687 A6NNZ2 444 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 NT5C1B-RDH14C9J2C7 533 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 GABRB2P47870 512 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 ATP1A2P50993 1020 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 HNRNPH2P55795 449 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 TRIP13Q15645 432 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 UPP1Q16831 310 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 TUBB8Q3ZCM7 444 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 DENND2CQ68D51 928 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 TXNRD3NBQ6F5E7 133 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 FNIP1Q8TF40 1166 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 SNF8Q96H20 258 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 BCCIPQ9P287 314 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 EOMESO95936 686 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 NUDT17P0C025 328 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 RARGP13631 454 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 IVDP26440 423 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 RPL9P32969 192 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 ADCY8P40145 1251 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 GNGT1P63211 74 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 GRIK3Q13003 919 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 PDCLQ13371 301 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 WSCD1Q658N2 575 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 RAPGEF5Q92565 580 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 HLA-CQ95604 372 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 SENP8Q96LD8 212 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 ASB2Q96Q27 587 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 SEMA4AQ9H3S1 761 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 METTL5Q9NRN9 209 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-204ENST00000547687 FGF18O76093 207 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 ATF2P15336 505 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 GOLGA7BQ2TAP0 167 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 ADGRD2Q7Z7M1 963 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 OSTM1Q86WC4 334 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 CRYBG2Q8N1P7 616 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 LRRC43Q8N309 656 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 ACSF2Q96CM8 615 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 MCRS1Q96EZ8 462 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 NEU2Q9Y3R4 380 aa17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-204ENST00000547687 LRRD1A4D1F6 860 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TP73O15350 636 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 HOXA2O43364 376 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 B4GALT3O60512 393 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 SHBGP04278 402 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 WARSP23381 471 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 PTPN7P35236 360 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 LMNB2Q03252 620 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TUSC3Q13454 348 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 SLC29A2Q14542 456 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 STILQ15468 1287 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 HADHQ16836 314 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TFDP3Q5H9I0 405 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TTC19Q6DKK2 380 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 ARFGAP1Q8N6T3 406 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 EMC1Q8N766 993 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 NECAB3Q96P71 396 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TRIOO75962 3097 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 hCG_1818297A0A087WSY0 165 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 LIASO43766 372 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 LRCH4O75427 683 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 B3GAT3O94766 335 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 KRT7P08729 469 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 KCNA5P22460 613 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 ITGA8P53708 1063 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 CAV1Q03135 178 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 RHBDF2Q6PJF5 856 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 CCDC25Q86WR0 208 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TTC30AQ86WT1 665 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 ZWILCHQ9H900 591 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
CHMP1A-204ENST00000547687 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-204ENST00000547687 INPPL1O15357 1258 aa17.27■□□□□ 0.36
CHMP1A-204ENST00000547687 IVLP07476 585 aa17.27■□□□□ 0.36
CHMP1A-204ENST00000547687 CDKN2BP42772 138 aa17.27■□□□□ 0.36
CHMP1A-204ENST00000547687 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms