RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 PPP6R3Q5H9R7 873 aaPredicted RBP16.15■□□□□ 0.18
BRF1-212ENST00000547562 PLEKHH3Q7Z736 793 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 C7orf31Q8N865 590 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 BANPQ8N9N5 519 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 ANKLE1Q8NAG6 615 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 SYT17Q9BSW7 474 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 FRMD8Q9BZ67 464 aaPredicted RBP16.15■□□□□ 0.18
BRF1-212ENST00000547562 RNF19AQ9NV58 838 aa16.15■□□□□ 0.18
BRF1-212ENST00000547562 UBQLN1Q9UMX0 589 aaKnown RBP16.15■□□□□ 0.18
BRF1-212ENST00000547562 SMIM35A0A1B0GVV1 85 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 TM9SF1O15321 606 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 HCRTO43612 131 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 AVILO75366 819 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
BRF1-212ENST00000547562 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 BST2Q10589 180 aaKnown RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 KBTBD12Q3ZCT8 623 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 FBXO47Q5MNV8 452 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 FAM182AQ5T1J6 154 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 SWT1Q5T5J6 900 aaKnown RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 SLC26A9Q7LBE3 791 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 AGGF1Q8N302 714 aaeCLIP16.14■□□□□ 0.17
BRF1-212ENST00000547562 ANKRD52Q8NB46 1076 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 CLEC4CQ8WTT0 213 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 PPP1R13LQ8WUF5 828 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 KBTBD7Q8WVZ9 684 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 C11orf84Q9BUA3 381 aaPredicted RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 CD248Q9HCU0 757 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 DOCK3Q8IZD9 2030 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 MBLAC1A4D2B0 266 aaPredicted RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 A6NJR5 290 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 MAP3K6O95382 1288 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 F2P00734 622 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 FGFR1P11362 822 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 CYP2C9P11712 490 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 CCDC130P13994 396 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 NQO1P15559 274 aaKnown RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 AKAP5P24588 427 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 CYP2F1P24903 491 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 ADRA1DP25100 572 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 BCAT1P54687 386 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 YWHAZP63104 245 aaKnown RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 DPYSL2Q16555 572 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 FAM228AQ86W67 206 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 TCP10LQ8TDR4 215 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 SLC44A1Q8WWI5 657 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 ZNF75CPQ92670 426 aaPredicted RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 CENPIQ92674 756 aaPredicted RBP16.14■□□□□ 0.17
BRF1-212ENST00000547562 APOL6Q9BWW8 343 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 KLC2Q9H0B6 622 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 ETNK2Q9NVF9 386 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 IKBKGQ9Y6K9 419 aa16.14■□□□□ 0.17
BRF1-212ENST00000547562 IQANK1A0A1B0GTG1 560 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 GOLGA8RI6L899 631 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 PIRO00625 290 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 PDGFRBP09619 1106 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 ADORA2BP29275 332 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 L1CAMP32004 1257 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 SCNN1AP37088 669 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 MAGEA6P43360 314 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 KCNJ2P63252 427 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 PTK7Q13308 1070 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 SEPT7Q16181 437 aaKnown RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 ARCQ7LC44 396 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 CRYBG2Q8N1P7 616 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 THOC1Q96FV9 657 aaKnown RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 PNPLA8Q9NP80 782 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 USH1CQ9Y6N9 552 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 HGSO14964 777 aaPredicted RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 CD4P01730 458 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 MT-ND3P03897 115 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 KLHL29Q96CT2 875 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 KLF6Q99612 283 aaPredicted RBP16.13■□□□□ 0.17
BRF1-212ENST00000547562 CYLDQ9NQC7 956 aa16.13■□□□□ 0.17
BRF1-212ENST00000547562 SMIM28A0A1B0GU29 152 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
BRF1-212ENST00000547562 ATP6V1G2O95670 118 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 INHBAP08476 426 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 LMO2P25791 158 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 AXLP30530 894 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 SKIV2L2P42285 1042 aaKnown RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 ATXN1P54253 815 aaKnown RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 ASRGL1Q7L266 308 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 CAND1Q86VP6 1230 aaKnown RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 CDKL3Q8IVW4 592 aaPredicted RBP16.12■□□□□ 0.17
BRF1-212ENST00000547562 ZNF276Q8N554 614 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 CCDC110Q8TBZ0 833 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 MAGEC3Q8TD91 643 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
BRF1-212ENST00000547562 PARK7Q99497 189 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms