RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 MUC6Q6W4X9 2439 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 OR6C75A6NL08 312 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 VNN1O95497 513 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 CPB1P15086 417 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 COMTP21964 271 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 NSFP46459 744 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 GPR17Q13304 367 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 MESDQ14696 234 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 CYP1B1Q16678 543 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ACSF2Q96CM8 615 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 AP1M1Q9BXS5 423 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ZNF518BQ9C0D4 1074 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 KCNK12Q9HB15 430 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 PCYOX1Q9UHG3 505 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 ITGA11Q9UKX5 1188 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 POLIQ9UNA4 740 aa18.13■□□□□ 0.49
RBFOX1-207ENST00000547338 SPOPO43791 374 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 PHF2O75151 1096 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 XYLBO75191 536 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 LAMP2P13473 410 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 FSHRP23945 695 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 GBP2P32456 591 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 CDR1P51861 262 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 C1QBPQ07021 282 aaKnown RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 NCOA4Q13772 614 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 LIMS2Q7Z4I7 341 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 LRRTM3Q86VH5 581 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 PHF13Q86YI8 300 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 LRRC52Q8N7C0 313 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 ST13P5Q8NFI4 369 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 PGLYRP2Q96PD5 576 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 OXCT2Q9BYC2 517 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 FEZ2Q9UHY8 353 aaPredicted RBP18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 SCINQ9Y6U3 715 aa18.12■□□□□ 0.49
RBFOX1-207ENST00000547338 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 TMEM221A6NGB7 291 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ANHXE9PGG2 379 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 M0R296 226 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 PRRG1O14668 218 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 LSM8O95777 96 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ASS1P00966 412 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 COL9A1P20849 921 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 MAN1A1P33908 653 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 CCR2P41597 374 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 SIGLEC14Q08ET2 396 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 HTR4Q13639 388 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 SV2CQ496J9 727 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 PABPC1LQ4VXU2 614 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 DCAF12L1Q5VU92 463 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 GSPT2Q8IYD1 628 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ATAD1Q8NBU5 361 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 FAM76AQ8TAV0 307 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 FGF13Q92913 245 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ZNF560Q96MR9 790 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ERP44Q9BS26 406 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 ZCWPW1Q9H0M4 648 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 DDX47Q9H0S4 455 aaKnown RBP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 HOMER3Q9NSC5 361 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 GDAP2Q9NXN4 497 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 MAFFQ9ULX9 164 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 YIPF1Q9Y548 306 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
RBFOX1-207ENST00000547338 GOLGA6CA6NDK9 693 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 MYO1FO00160 1098 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 HCRTO43612 131 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 RHOP08100 348 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 TMEM191BP0C7N4 346 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 GOLGA6DP0CG33 693 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 PNPLA4P41247 253 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 FNTAP49354 379 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 NOP14P78316 857 aaKnown RBP18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 DR1Q01658 176 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 DUSP4Q13115 394 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 HLTFQ14527 1009 aaKnown RBP eCLIP18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 OSTM1Q86WC4 334 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 UBR7Q8N806 425 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 C12orf50Q8NA57 414 aaPredicted RBP18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 ALG3Q92685 438 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 TCEAL4Q96EI5 215 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 PI4K2AQ9BTU6 479 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 FAM204AQ9H8W3 233 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 GOLGA6AQ9NYA3 693 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 DSEQ9UL01 958 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 WDFY4Q6ZS81 3184 aa18.1■□□□□ 0.49
RBFOX1-207ENST00000547338 NARSO43776 548 aaKnown RBP18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 MOSPD3O75425 235 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 SOAT2O75908 522 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 PDGFBP01127 241 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 ELF1P32519 619 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 ZNF132P52740 706 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 RBP5P82980 135 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 TWF1Q12792 350 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 CCDC142Q17RM4 750 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 DUPD1Q68J44 220 aa18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 SYDE1Q6ZW31 735 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-207ENST00000547338 CROCCP2Q86T23 111 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms