RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LGMNQ99538 433 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MED4Q9NPJ6 270 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 PIGVQ9NUD9 493 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 SEPT10Q9P0V9 454 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 DERAQ9Y315 318 aa12.48□□□□□ -0.41
CCDC38-202ENST00000546386 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 XPOTO43592 962 aaKnown RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 FNTAP49354 379 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 GPNMBQ14956 572 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 BSPRYQ5W0U4 402 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 ATAD1Q8NBU5 361 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 SAYSD1Q9NPB0 183 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 KCNN4O15554 427 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 KPNA6O60684 536 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 KRT7P08729 469 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 SRGAP2BP0DMP2 458 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 HOXD10P28358 340 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 RBL1P28749 1068 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 CETN2P41208 172 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 LRRC14Q15048 493 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 SLC39A12Q504Y0 691 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 ZBED8Q8IZ13 594 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 P3H4Q92791 437 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 CWC15Q9P013 229 aaKnown RBP12.47□□□□□ -0.41
CCDC38-202ENST00000546386 SFMBT1Q9UHJ3 866 aa12.47□□□□□ -0.41
CCDC38-202ENST00000546386 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 RIPK2O43353 540 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 FYNP06241 537 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 KLRC2P26717 231 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 PNPLA4P41247 253 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 CTCFP49711 727 aaPredicted RBP12.46□□□□□ -0.41
CCDC38-202ENST00000546386 GNGT1P63211 74 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 EFTUD2Q15029 972 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC38-202ENST00000546386 TRAF7Q6Q0C0 670 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 UNC93AQ86WB7 457 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 PQLC3Q8N755 202 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 WDR35Q9P2L0 1181 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
CCDC38-202ENST00000546386 AP4E1Q9UPM8 1137 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
CCDC38-202ENST00000546386 POC1B-GALNT4F8VUJ3 575 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 MDM4O15151 490 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 FKTNO75072 461 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 PPFIA2O75334 1257 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 MOCS2O96007 188 aaPredicted RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 HSPA6P17066 643 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 RPL22P35268 128 aaKnown RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 GRIK1P39086 918 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 GRIA1P42261 906 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 PTK7Q13308 1070 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 FNBP1LQ5T0N5 605 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 ALS2CLQ60I27 953 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 OVOS1Q6IE37 1185 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 CYP4X1Q8N118 509 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 PLD5Q8N7P1 536 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 NIPA2Q8N8Q9 360 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 KCTD15Q96SI1 283 aaPredicted RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 SH3GL2Q99962 352 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 SELENOSQ9BQE4 189 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.42
CCDC38-202ENST00000546386 NEU2Q9Y3R4 380 aa12.46□□□□□ -0.42
CCDC38-202ENST00000546386 BHMG1C9JSJ3 638 aaPredicted RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 GABRDO14764 452 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 TBX18O95935 607 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 LRPAP1P30533 357 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 SSTR1P30872 391 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 MAN1A1P33908 653 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 IFNAR2P48551 515 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 CRADDP78560 199 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 OASLQ15646 514 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 ALLCQ8N6M5 410 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 RSPH1Q8WYR4 309 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 RNF34Q969K3 372 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 DDIT4Q9NX09 232 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 XPO7Q9UIA9 1087 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 OPA1O60313 960 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 STAU1O95793 577 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 NR1D1P20393 614 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 TAP1Q03518 808 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 PDIA2Q13087 525 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms