RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 SMIM35A0A1B0GVV1 85 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 SOWAHBA6NEL2 793 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 SDR42E2A6NKP2 422 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 ANKRD65E5RJM6 399 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 NCAM2O15394 837 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 TGFB1I1O43294 461 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 DARSP14868 501 aaKnown RBP12.24□□□□□ -0.45
CHERP-203ENST00000546361 KCNA10Q16322 511 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 CCNG2Q16589 344 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 SPDYAQ5MJ70 313 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 NECAB2Q7Z6G3 386 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 C4orf32Q8N8J7 132 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 SGF29Q96ES7 293 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 NXF3Q9H4D5 531 aaKnown RBP12.24□□□□□ -0.45
CHERP-203ENST00000546361 ATP13A1Q9HD20 1204 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 DMGDHQ9UI17 866 aaKnown RBP12.24□□□□□ -0.45
CHERP-203ENST00000546361 IPPQ9Y573 584 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 CKBP12277 381 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 AMPD1P23109 780 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHERP-203ENST00000546361 PIGZQ86VD9 579 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 IL17RAQ96F46 866 aa12.24□□□□□ -0.45
CHERP-203ENST00000546361 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 TRIM49D1C9J1S8 452 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 SERPINF2P08697 491 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 KCNA4P22459 653 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 MIPP30301 263 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 SLC8A1P32418 973 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 C3orf20Q8ND61 904 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 CLEC4DQ8WXI8 215 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 FAM84AQ96KN4 292 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 APOL5Q9BWW9 433 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 POPDC2Q9HBU9 364 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 CD274Q9NZQ7 290 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 UXTQ9UBK9 157 aaPredicted RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 MARCOQ9UEW3 520 aaPredicted RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 GRID1Q9ULK0 1009 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 MRPL42Q9Y6G3 142 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 STRCP1A6NGW2 1772 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 TCP11X1B4DZS4 312 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 F8VP50 259 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 SEPT4O43236 478 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.457e-8■■□□□ 12.4
CHERP-203ENST00000546361 RENBPP51606 427 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 PLD1Q13393 1074 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■■■■■ 38.1
CHERP-203ENST00000546361 TTLL9Q3SXZ7 439 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 MFSD7Q6UXD7 560 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 HSFY1Q96LI6 401 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 PPP1R36Q96LQ0 422 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 CEP41Q9BYV8 373 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 EML4Q9HC35 981 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 SIK3Q9Y2K2 1263 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 CARNS1A5YM72 827 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 PRPF4O43172 522 aaKnown RBP eCLIP12.23□□□□□ -0.455e-6■■■■□ 19.4
CHERP-203ENST00000546361 CALCAP01258 141 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 CTNNB1P35222 781 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 ATP5C1P36542 298 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 ARL4DP49703 201 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 PAPD7Q5XG87 772 aaKnown RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 C11orf63Q6NUN7 778 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 SGSM3Q96HU1 749 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 WWP1Q9H0M0 922 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 LRRC40Q9H9A6 602 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 ACTR5Q9H9F9 607 aaPredicted RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 AVENQ9NQS1 362 aaPredicted RBP12.23□□□□□ -0.45
CHERP-203ENST00000546361 ADA2Q9NZK5 511 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
CHERP-203ENST00000546361 A0A0B4J269 797 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 PPP1R37O75864 691 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 NPR3P17342 541 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 C6orf10Q5SRN2 563 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 TBC1D19Q8N5T2 526 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 KAT2BQ92831 832 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 IKZF4Q9H2S9 585 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 THG1LQ9NWX6 298 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 MSRAQ9UJ68 235 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 GIT1Q9Y2X7 761 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 USH1CQ9Y6N9 552 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 CCDC85CA6NKD9 419 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ADCY6O43306 1168 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 GRM5P41594 1212 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 SNCBQ16143 134 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 HYIQ5T013 277 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms