RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 ACOT9Q9Y305 439 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 ANKRD63C9JTQ0 380 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 F8VP50 259 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 GH1P01241 217 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 KRT8P05787 483 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 IFNA8P32881 189 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 GP5P40197 560 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 FMO1Q01740 532 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 SLFN11Q7Z7L1 901 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
NPC1L1-204ENST00000546276 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 GRIK1P39086 918 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PNPLA4P41247 253 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ZFP1Q6P2D0 407 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 NET1Q7Z628 596 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SPATA2LQ8IUW3 424 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 COLGALT1Q8NBJ5 622 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SHC3Q92529 594 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SCN3BQ9NY72 215 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PMPCBO75439 489 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 KRT36O76013 467 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 NOL4O94818 638 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ETS1P14921 441 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 GEMP55040 296 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PRKAA1Q13131 559 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 MAMLD1Q13495 774 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 HYIQ5T013 277 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 LRRC38Q5VT99 294 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ZCCHC23Q6ZST2 131 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 MICALL2Q8IY33 904 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ALLCQ8N6M5 410 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TUBGCP3Q96CW5 907 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 C17orf80Q9BSJ5 609 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 C10orf88Q9H8K7 445 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 CD274Q9NZQ7 290 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SORCS3Q9UPU3 1222 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 KANSL1LA0AUZ9 987 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 NPTXRO95502 500 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 MPOP05164 745 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PTPN7P35236 360 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TAF6P49848 677 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ECM1Q16610 540 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 LPCAT2Q7L5N7 544 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SH3TC2Q8TF17 1288 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TMEM79Q9BSE2 394 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 LRMDAQ9H2I8 198 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ERVK-5Q9HDB9 667 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SLCO1B3Q9NPD5 702 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 DDIT4Q9NX09 232 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 AAR2Q9Y312 384 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 WTIPA6NIX2 430 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TRIM13O60858 407 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ZNF23P17027 643 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 EIF4BP23588 611 aaKnown RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SERPINB1P30740 379 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ATICP31939 592 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PGM5Q15124 567 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 SPDYAQ5MJ70 313 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 OR6Y1Q8NGX8 325 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 RBBP8Q99708 897 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 NEUROG2Q9H2A3 272 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 PALMDQ9NP74 551 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 TSC22D4Q9Y3Q8 395 aa12.59□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM237BA0A1B0GVD1 139 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 PSMD10O75832 226 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 PROCP04070 461 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 APTXQ7Z2E3 356 aaKnown RBP12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 FAM131BQ86XD5 332 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 UBQLN1Q9UMX0 589 aaKnown RBP12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 PCDHGB4Q9UN71 923 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 NID2Q14112 1375 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 SLIT3O75094 1523 aa12.58□□□□□ -0.4
NPC1L1-204ENST00000546276 C2CD2LO14523 706 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms