RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 KAZNQ674X7 775 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 HERVK_113Q902F9 699 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
SKP2-208ENST00000546211 FBXO44Q9H4M3 255 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 HOMER3Q9NSC5 361 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 STIM2Q9P246 746 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 RAB21Q9UL25 225 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 SLC4A7Q9Y6M7 1214 aa20.29■□□□□ 0.84
SKP2-208ENST00000546211 C3orf70A6NLC5 250 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 M0QYT0 321 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 MDM4O15151 490 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 ENDOD1O94919 500 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 FYNP06241 537 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 HAPLN1P10915 354 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 KRT10P13645 584 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 OR1D2P34982 312 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 RDXP35241 583 aaKnown RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 GPR15P49685 360 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 CDH6P55285 790 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 MRPS25P82663 173 aaKnown RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 SLC7A5Q01650 507 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 KRT17Q04695 432 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 KRT81Q14533 505 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 CYP1B1Q16678 543 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 BSPRYQ5W0U4 402 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 WDR93Q6P2C0 686 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 CYP4V2Q6ZWL3 525 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 ANKS1BQ7Z6G8 1248 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 MAP7D3Q8IWC1 876 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 ZDHHC14Q8IZN3 488 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 C12orf50Q8NA57 414 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 SEPT5Q99719 369 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 LBHD1Q9BQE6 289 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 HERPUD2Q9BSE4 406 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 SNRNP25Q9BV90 132 aaKnown RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 ADAM33Q9BZ11 813 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 AMACRQ9UHK6 382 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 ZMYND8Q9ULU4 1186 aaPredicted RBP20.28■□□□□ 0.84
SKP2-208ENST00000546211 EFR3BQ9Y2G0 817 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 SLC27A5Q9Y2P5 690 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 PTPRSQ13332 1948 aa20.28■□□□□ 0.84
SKP2-208ENST00000546211 WDR27A2RRH5 827 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 HEXIM1O94992 359 aaKnown RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 H2AFXP16104 143 aaPredicted RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 RPL17P18621 184 aaKnown RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 YWHAGP61981 247 aaKnown RBP eCLIP20.27■□□□□ 0.84
SKP2-208ENST00000546211 RPL10AP62906 217 aaKnown RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 DEUP1Q05D60 604 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 DHX34Q14147 1143 aaKnown RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 PDK2Q15119 407 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 ERMARDQ5T6L9 678 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 SDHAF4Q5VUM1 108 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 BEND5Q7L4P6 421 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 HERC6Q8IVU3 1022 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 TTC9BQ8N6N2 239 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 SLC7A14Q8TBB6 771 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 PHOSPHO2Q8TCD6 241 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 HDAC7Q8WUI4 952 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 CALN1Q9BXU9 219 aa20.27■□□□□ 0.84
SKP2-208ENST00000546211 DMGDHQ9UI17 866 aaKnown RBP20.27■□□□□ 0.84
SKP2-208ENST00000546211 SYNJ2BP-COX16A0A087WUM0 186 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 ADAM12O43184 909 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 RTN3O95197 1032 aaPredicted RBP20.26■□□□□ 0.83
SKP2-208ENST00000546211 VNN2O95498 520 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 FNTAP49354 379 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 ATXN1P54253 815 aaKnown RBP20.26■□□□□ 0.83
SKP2-208ENST00000546211 VSNL1P62760 191 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 DUSP4Q13115 394 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 BRD3Q15059 726 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 TAZQ16635 292 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 BTBD8Q5XKL5 378 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 FBXO38Q6PIJ6 1188 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 CCDC137Q6PK04 289 aaKnown RBP20.26■□□□□ 0.83
SKP2-208ENST00000546211 DENND5BQ6ZUT9 1274 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 BNIPLQ7Z465 357 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 EDEM1Q92611 657 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 SPATA17Q96L03 361 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 RAD9AQ99638 391 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 CLSTN3Q9BQT9 956 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 LRRC19Q9H756 370 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 ABCC13Q9NSE7 274 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 COX16Q9P0S2 106 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 SCML2Q9UQR0 700 aa20.26■□□□□ 0.83
SKP2-208ENST00000546211 ERLIN1O75477 346 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 F9P00740 461 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 CD48P09326 243 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 ATP2A2P16615 1042 aaKnown RBP20.25■□□□□ 0.83
SKP2-208ENST00000546211 COILP38432 576 aaPredicted RBP20.25■□□□□ 0.83
SKP2-208ENST00000546211 PITX1P78337 314 aaPredicted RBP20.25■□□□□ 0.83
SKP2-208ENST00000546211 DR1Q01658 176 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 NME3Q13232 169 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 OTUD1Q5VV17 481 aaPredicted RBP20.25■□□□□ 0.83
SKP2-208ENST00000546211 FAM131BQ86XD5 332 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 CCDC105Q8IYK2 499 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 ARHGAP18Q8N392 663 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 C1orf54Q8WWF1 131 aa20.25■□□□□ 0.83
SKP2-208ENST00000546211 PGAP3Q96FM1 320 aaPredicted RBP20.25■□□□□ 0.83
SKP2-208ENST00000546211 MAK16Q9BXY0 300 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms