RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 LAMB3Q13751 1172 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 TMTC4Q5T4D3 741 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 RANBP10Q6VN20 620 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 BHLHA9Q7RTU4 235 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 LIX1LQ8IVB5 337 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 MYO1HQ8N1T3 1032 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 SMCR8Q8TEV9 937 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 CUL5Q93034 780 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 ZNF668Q96K58 619 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 HIST1H2AAQ96QV6 131 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 GAR1Q9NY12 217 aaKnown RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 NKX1-2Q9UD57 310 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-224ENST00000545688 TCEAL9Q9UHQ7 104 aa5.67□□□□□ -1.5
SNHG1-224ENST00000545688 TTC3P53804 2025 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 LOC105371045A0A1W2PR82 267 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 A8MVJ9 347 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 SOCS2O14508 198 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 CD19P15391 556 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 FAM193AP78312 1265 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 CFHR3Q02985 330 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 GBX1Q14549 363 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 MFSD13AQ14CX5 517 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 RBMS2Q15434 407 aaKnown RBP5.66□□□□□ -1.5
SNHG1-224ENST00000545688 ZNF260Q3ZCT1 412 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 PPP4R4Q6NUP7 873 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 VSTM1Q6UX27 236 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 EDC3Q96F86 508 aaKnown RBP5.66□□□□□ -1.5
SNHG1-224ENST00000545688 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 MTMR4Q9NYA4 1195 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 DNAJB11Q9UBS4 358 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 VPS51Q9UID3 782 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 SLC27A6Q9Y2P4 619 aa5.66□□□□□ -1.5
SNHG1-224ENST00000545688 FRMPD2Q68DX3 1309 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-224ENST00000545688 CLIC1O00299 241 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 KCNAB3O43448 404 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 INMTO95050 263 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 NTN1O95631 604 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 ZNF91Q05481 1191 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 SLC14A1Q13336 389 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 GALEQ14376 348 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 CC2D1BQ5T0F9 858 aaKnown RBP5.65□□□□□ -1.5
SNHG1-224ENST00000545688 TMEM63BQ5T3F8 832 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 MANEALQ5VSG8 457 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 CLEC9AQ6UXN8 241 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 MRPL10Q7Z7H8 261 aaKnown RBP5.65□□□□□ -1.5
SNHG1-224ENST00000545688 C12orf76Q8N812 135 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-224ENST00000545688 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 NGDNQ8NEJ9 315 aaKnown RBP5.65□□□□□ -1.5
SNHG1-224ENST00000545688 MSLNLQ96KJ4 702 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 SIGLEC11Q96RL6 698 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 STEAP1Q9UHE8 339 aa5.65□□□□□ -1.5
SNHG1-224ENST00000545688 F8W8V4 182 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 MT-ND5P03915 603 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 PRF1P14222 555 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 ADRA1DP25100 572 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 RBL1P28749 1068 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 THBS4P35443 961 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 GPC5P78333 572 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 CFHR1Q03591 330 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 ST3GAL2Q16842 350 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-224ENST00000545688 TSR2Q969E8 191 aaKnown RBP5.64□□□□□ -1.51
SNHG1-224ENST00000545688 SNX22Q96L94 193 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 USP29Q9HBJ7 922 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 AS3MTQ9HBK9 375 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 TMEM184CQ9NVA4 438 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 PI4KBQ9UBF8 816 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 ZNF212Q9UDV6 495 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 HPSEQ9Y251 543 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 PCDHGB6Q9Y5F9 930 aa5.64□□□□□ -1.51
SNHG1-224ENST00000545688 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-224ENST00000545688 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 FYB1O15117 783 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 CA12O43570 354 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 SNX2O60749 519 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 PRAMEF2O60811 474 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 CYP19A1P11511 503 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-224ENST00000545688 RHCEP18577 417 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 COPAP53621 1224 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 EIF4A1P60842 406 aaKnown RBP5.63□□□□□ -1.51
SNHG1-224ENST00000545688 YPEL5P62699 121 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
SNHG1-224ENST00000545688 RHDQ02161 417 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 SEMA5AQ13591 1074 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 FHL1Q13642 323 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 TRIM71Q2Q1W2 868 aaKnown RBP5.63□□□□□ -1.51
SNHG1-224ENST00000545688 GFOD2Q3B7J2 385 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 MZT2AQ6P582 158 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 IRF2BP2Q7Z5L9 587 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 C14orf80Q86SX3 495 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 WACQ9BTA9 647 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 SELENOOQ9BVL4 669 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 TBC1D23Q9NUY8 699 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 OBP2AQ9NY56 170 aa5.63□□□□□ -1.51
SNHG1-224ENST00000545688 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms