RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 KLRC2P26717 231 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 MIPP30301 263 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 ERVK-21P61565 698 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
SCARB1-209ENST00000545305 SCYL2Q6P3W7 929 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 CTAGE6Q86UF2 777 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 CCDC50Q8IVM0 306 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 CTAGE4Q8IX94 777 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 STKLD1Q8NE28 680 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 SLC7A14Q8TBB6 771 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 MICAL1Q8TDZ2 1067 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 SLITRK1Q96PX8 696 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 FAM204AQ9H8W3 233 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 PCSK1NQ9UHG2 260 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 USP18Q9UMW8 372 aa14.39□□□□□ -0.11
SCARB1-209ENST00000545305 YBX2Q9Y2T7 364 aaKnown RBP14.39□□□□□ -0.11
SCARB1-209ENST00000545305 M0QYT0 321 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 GRM6O15303 877 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 GLUD1P00367 558 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 RALAP11233 206 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 TCF4P15884 667 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 PSEN1P49768 467 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 EPHB3P54753 998 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 ERVFC1P60507 584 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 USP46P62068 366 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 DEUP1Q05D60 604 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 ZNF211Q13398 564 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 GPM6BQ13491 265 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 CCDC149Q6ZUS6 474 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 SND1Q7KZF4 910 aaKnown RBP eCLIP14.38□□□□□ -0.111e-9■■■■□ 23.2
SCARB1-209ENST00000545305 CREG2Q8IUH2 290 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 RCOR2Q8IZ40 523 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 MRPL43Q8N983 215 aaKnown RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 PDZD8Q8NEN9 1154 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 ACTRT1Q8TDG2 376 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 EDEM1Q92611 657 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 CENPIQ92674 756 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 NPY6RQ99463 290 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 TTLL2Q9BWV7 592 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 PBX4Q9BYU1 374 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 NKX2-4Q9H2Z4 354 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 IL37Q9NZH6 218 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 GMIPQ9P107 970 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 MAGED2Q9UNF1 606 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-209ENST00000545305 NAALADL1Q9UQQ1 740 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 INSL5Q9Y5Q6 135 aa14.38□□□□□ -0.11
SCARB1-209ENST00000545305 SYNJ2BP-COX16A0A087WUM0 186 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 FAM92AA1XBS5 289 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 C2orf71A6NGG8 1288 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 FSCN2O14926 492 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TGM5O43548 720 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.116e-6■□□□□ 9.3
SCARB1-209ENST00000545305 TRUB2O95900 331 aaKnown RBP14.37□□□□□ -0.11
SCARB1-209ENST00000545305 F9P00740 461 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 DNAJB1P25685 340 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 GBP1P32455 592 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 HDAC4P56524 1084 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TWF1Q12792 350 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TAF10Q12962 218 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 MTMR3Q13615 1198 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 LONRF2Q1L5Z9 754 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 SH3PXD2AQ5TCZ1 1133 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 SYPL2Q5VXT5 272 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 RSRC2Q7L4I2 434 aaKnown RBP14.37□□□□□ -0.11
SCARB1-209ENST00000545305 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 RASGEF1CQ8N431 466 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 ARFGAP1Q8N6T3 406 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 OVCA2Q8WZ82 227 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 MS4A14Q96JA4 679 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SCARB1-209ENST00000545305 KLHL11Q9NVR0 708 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TMEM51Q9NW97 253 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 DDIT4Q9NX09 232 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 COX16Q9P0S2 106 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 FBXW11Q9UKB1 542 aa14.37□□□□□ -0.11
SCARB1-209ENST00000545305 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-209ENST00000545305 GOLGA6L10A0A0M3HER8 536 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 HIDE1A8MVS5 230 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 H3BNC9 293 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms