RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 CACHD1Q5VU97 1274 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
DDX47-211ENST00000544497 CIR1Q86X95 450 aaPredicted RBP6.91□□□□□ -1.3
DDX47-211ENST00000544497 RHOT2Q8IXI1 618 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 CACNA2D3Q8IZS8 1091 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 GLIS1Q8NBF1 620 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 CYP2W1Q8TAV3 490 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 SNX27Q96L92 541 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 GPR87Q9BY21 358 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 SLITRK6Q9H5Y7 841 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 GRHPRQ9UBQ7 328 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 GTF2A1LQ9UNN4 478 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 USP15Q9Y4E8 981 aaPredicted RBP6.91□□□□□ -1.3
DDX47-211ENST00000544497 RAD54BQ9Y620 910 aa6.91□□□□□ -1.3
DDX47-211ENST00000544497 CCDC195A0A1B0GUA6 201 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 TRIM38O00635 465 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 DCLK1O15075 740 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 NPC1O15118 1278 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 PPFIA4O75335 1185 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 ERN1O75460 977 aaKnown RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 WDHD1O75717 1129 aaPredicted RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 ATXN1LP0C7T5 689 aaKnown RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 GABRB3P28472 473 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 APOBEC3AP31941 199 aaPredicted RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 PTDSS1P48651 473 aaKnown RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 LILRA4P59901 499 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 PRKG1Q13976 671 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 SPARCL1Q14515 664 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 AGAP9Q5VTM2 703 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 TAF2Q6P1X5 1199 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 FOXR2Q6PJQ5 311 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 CRTC1Q6UUV9 634 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 GAS2L3Q86XJ1 694 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 OR56A1Q8NGH5 318 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 TRAPPC12Q8WVT3 735 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 NEU1Q99519 415 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 ZSWIM1Q9BR11 485 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 MESP1Q9BRJ9 268 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 MAGEH1Q9H213 219 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 RNPEPQ9H4A4 650 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 AS3MTQ9HBK9 375 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 EIF2B4Q9UI10 523 aaKnown RBP6.9□□□□□ -1.3
DDX47-211ENST00000544497 EVC2Q86UK5 1308 aa6.9□□□□□ -1.3
DDX47-211ENST00000544497 A0A087WZ62 844 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 GOLGA6L6A8MZA4 724 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 SYT5O00445 386 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 ACKR2O00590 384 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 TOR1BO14657 336 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 PIP5K1BO14986 540 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 GPR42O15529 346 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 CCP110O43303 1012 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 RASAL1O95294 804 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 MMP10P09238 476 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 SPATA31D3P0C874 917 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 DPEP1P16444 411 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 GCLCP48506 637 aaPredicted RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 PXNP49023 591 aaPredicted RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 HSD11B2P80365 405 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 POU5F1BQ06416 359 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 DDX10Q13206 875 aaKnown RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 C1QL3Q5VWW1 255 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 SPTY2D1Q68D10 685 aaPredicted RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 PLAG1Q6DJT9 500 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 SPATA31D4Q6ZUB0 917 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 USP49Q70CQ1 688 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 ZNF280BQ86YH2 543 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 TBC1D20Q96BZ9 403 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 MNTQ99583 582 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 NECTIN3Q9NQS3 549 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 RNF181Q9P0P0 153 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 HSFX1Q9UBD0 423 aa6.89□□□□□ -1.31
DDX47-211ENST00000544497 MTO1Q9Y2Z2 717 aaKnown RBP6.89□□□□□ -1.31
DDX47-211ENST00000544497 COL5A3P25940 1745 aaPredicted RBP6.88□□□□□ -1.31
DDX47-211ENST00000544497 CD163L1Q9NR16 1453 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 NSD3Q9BZ95 1437 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 A0A1B0GTW7 788 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 RGS10O43665 173 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 PIAS2O75928 621 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 GPANK1O95872 356 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 ITGALP20701 1170 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 FGFR4P22455 802 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 TOB1P50616 345 aaPredicted RBP6.88□□□□□ -1.31
DDX47-211ENST00000544497 RABGGTBP53611 331 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 TGFB2P61812 414 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 PREPLQ4J6C6 727 aaPredicted RBP6.88□□□□□ -1.31
DDX47-211ENST00000544497 ALFQ53S48 1182 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 KCTD20Q7Z5Y7 419 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
DDX47-211ENST00000544497 ZNF808Q8N4W9 903 aaPredicted RBP6.88□□□□□ -1.31
DDX47-211ENST00000544497 STYXQ8WUJ0 223 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 ABHD8Q96I13 439 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 GDF15Q99988 308 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 SORBS1Q9BX66 1292 aaKnown RBP6.88□□□□□ -1.31
DDX47-211ENST00000544497 TMEM120AQ9BXJ8 343 aa6.88□□□□□ -1.31
DDX47-211ENST00000544497 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms