RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 CUL5Q93034 780 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 TSR2Q969E8 191 aaKnown RBP4.12□□□□□ -1.75
CCDC170-203ENST00000544131 ZC3H10Q96K80 434 aaKnown RBP4.12□□□□□ -1.75
CCDC170-203ENST00000544131 USP29Q9HBJ7 922 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 TRIM36Q9NQ86 728 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 GOLGA6AQ9NYA3 693 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 DKK4Q9UBT3 224 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 RIMKLBQ9ULI2 386 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 PCDHGB6Q9Y5F9 930 aa4.12□□□□□ -1.75
CCDC170-203ENST00000544131 CLIC1O00299 241 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 HRGP04196 525 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 HOXD9P28356 352 aaPredicted RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 CCT4P50991 539 aaKnown RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 FAM193AP78312 1265 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 KCNB1Q14721 858 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 GFOD2Q3B7J2 385 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 VSTM1Q6UX27 236 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 USP49Q70CQ1 688 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 CHST15Q7LFX5 561 aaPredicted RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 LINC01465Q8N7H1 131 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 C12orf76Q8N812 135 aaPredicted RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 ZNF398Q8TD17 642 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 PNISRQ8TF01 805 aaKnown RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 IPCEF1Q8WWN9 437 aaPredicted RBP4.11□□□□□ -1.75
CCDC170-203ENST00000544131 HMCESQ96FZ2 354 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 TMEM79Q9BSE2 394 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 APOL5Q9BWW9 433 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 BRIP1Q9BX63 1249 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 ZNF212Q9UDV6 495 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 STEAP1Q9UHE8 339 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 SLC27A6Q9Y2P4 619 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 AFG3L2Q9Y4W6 797 aa4.11□□□□□ -1.75
CCDC170-203ENST00000544131 INMTO95050 263 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 FGBP02675 491 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 MT-ND5P03915 603 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 HOXB6P17509 224 aaKnown RBP4.1□□□□□ -1.75
CCDC170-203ENST00000544131 ATF7P17544 494 aaPredicted RBP4.1□□□□□ -1.75
CCDC170-203ENST00000544131 CFHR3Q02985 330 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 GBX1Q14549 363 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 MFSD13AQ14CX5 517 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 RBMS2Q15434 407 aaKnown RBP4.1□□□□□ -1.75
CCDC170-203ENST00000544131 SEC23BQ15437 767 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 ZNF260Q3ZCT1 412 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 TMEM63BQ5T3F8 832 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 TMTC4Q5T4D3 741 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 LIX1LQ8IVB5 337 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 WDR75Q8IWA0 830 aaKnown RBP4.1□□□□□ -1.75
CCDC170-203ENST00000544131 C16orf52Q8NHV5 167 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 VPS50Q96JG6 964 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 SNX22Q96L94 193 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 AS3MTQ9HBK9 375 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 OBP2AQ9NY56 170 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 DNAJB11Q9UBS4 358 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 HPSEQ9Y251 543 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 SNX13Q9Y5W8 968 aa4.1□□□□□ -1.75
CCDC170-203ENST00000544131 A8MVJ9 347 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 F8W8V4 182 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 H3BNC9 293 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 FYB1O15117 783 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 KCNAB3O43448 404 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 CA12O43570 354 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 CYP19A1P11511 503 aaPredicted RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 RHCEP18577 417 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 EIF4A1P60842 406 aaKnown RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 RHDQ02161 417 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 SLC14A1Q13336 389 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 ST3GAL2Q16842 350 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 MANEALQ5VSG8 457 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 RRAGBQ5VZM2 374 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 AWAT2Q6E213 333 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 RNF44Q7L0R7 432 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 MRPL10Q7Z7H8 261 aaKnown RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 P3H2Q8IVL5 708 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 SDR16C5Q8N3Y7 309 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 FSTL5Q8N475 847 aaPredicted RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 PNPLA1Q8N8W4 532 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 NRACQ8N912 160 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 FAM71DQ8N9W8 422 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 TTC8Q8TAM2 541 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 COQ8BQ96D53 544 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 EDC3Q96F86 508 aaKnown RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 ZNF668Q96K58 619 aaPredicted RBP4.09□□□□□ -1.75
CCDC170-203ENST00000544131 SIGLEC11Q96RL6 698 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 TMEM184CQ9NVA4 438 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 MTMR4Q9NYA4 1195 aa4.09□□□□□ -1.75
CCDC170-203ENST00000544131 SOCS2O14508 198 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 PRAMEF2O60811 474 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 TMEM225BP0DP42 221 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 PRF1P14222 555 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 ATF3P18847 181 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 ADRA1DP25100 572 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 YPEL5P62699 121 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 GPC5P78333 572 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 TXNL4AP83876 142 aaKnown RBP4.08□□□□□ -1.76
CCDC170-203ENST00000544131 SEMA5AQ13591 1074 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 FHL1Q13642 323 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 LAMB3Q13751 1172 aa4.08□□□□□ -1.76
CCDC170-203ENST00000544131 GALEQ14376 348 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms