RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 MCUQ8NE86 351 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 GAD1Q99259 594 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 CPNE1Q99829 537 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 DZANK1Q9NVP4 752 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 WARS2Q9UGM6 360 aaKnown RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 SUSD2Q9UGT4 822 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 PRG3Q9Y2Y8 225 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 RRP8O43159 456 aaKnown RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 GALCP54803 685 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 CYP27A1Q02318 531 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 TGM3Q08188 693 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 TMEM31Q5JXX7 168 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 C16orf59Q7L2K0 433 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 SLC13A5Q86YT5 568 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 MREGQ8N565 214 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 ZSCAN18Q8TBC5 510 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 TMEM237Q96Q45 408 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 LRRC40Q9H9A6 602 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-211ENST00000543710 TRHDEQ9UKU6 1024 aa8.07□□□□□ -1.12
VPS13D-211ENST00000543710 SYNJ2BP-COX16A0A087WUM0 186 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 FAM237AA0A1B0GTK4 181 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 POTEMA6NI47 508 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 IFRD1O00458 451 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 TLR2O60603 784 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RHOBTB1O94844 696 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 WEE2P0C1S8 567 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RPL26P61254 145 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CNTN1Q12860 1018 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SGCGQ13326 291 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ACVR2BQ13705 512 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 NFIL3Q16649 462 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PLA2G4FQ68DD2 849 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 TMEM154Q6P9G4 183 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 FOXR1Q6PIV2 292 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 DDIASQ8IXT1 998 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PTPRN2Q92932 1015 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SH3KBP1Q96B97 665 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 UROC1Q96N76 676 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 REEP2Q9BRK0 252 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 MRPS26Q9BYN8 205 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SPATC1LQ9H0A9 340 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 COX16Q9P0S2 106 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 F5H6K3 240 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 GLUD1P00367 558 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ADORA2AP29274 412 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 KLRC3Q07444 240 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SLC20A2Q08357 652 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 MSLNQ13421 630 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RABGAP1LQ5R372 815 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 KIAA1143Q96AT1 154 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 NFKBIZQ9BYH8 718 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ILKAPQ9H0C8 392 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 UBQLN1Q9UMX0 589 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 INSL6Q9Y581 213 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 AK9Q5TCS8 1911 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RAD51CO43502 376 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 BMP10O95393 424 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SELPP16109 830 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PGAM1P18669 254 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SERPINB1P30740 379 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RPIAP49247 311 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RAP1GDS1P52306 607 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 AIF1P55008 147 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 GUCY1A3Q02108 690 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CUL2Q13617 745 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CLEC16AQ2KHT3 1053 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ZNF296Q8WUU4 475 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 EGFL8Q99944 293 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SYTL2Q9HCH5 934 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ELOVL2Q9NXB9 296 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SUFUQ9UMX1 484 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ROBO3Q96MS0 1386 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 SPTLC1O15269 473 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ICAM1P05362 532 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CCDC159P0C7I6 412 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 RRM2P31350 389 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CAP2P40123 477 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PEX5P50542 639 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ACTR2P61160 394 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 NCOA4Q13772 614 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 HLFQ16534 295 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 CDKAL1Q5VV42 579 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PDE12Q6L8Q7 609 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PKN3Q6P5Z2 889 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 C1orf131Q8NDD1 294 aaKnown RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 DDHD1Q8NEL9 900 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 HDAC7Q8WUI4 952 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 THAP11Q96EK4 314 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 VAT1Q99536 393 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 ASCC2Q9H1I8 757 aaPredicted RBP8.06□□□□□ -1.12
VPS13D-211ENST00000543710 EFCAB1Q9HAE3 211 aa8.06□□□□□ -1.12
VPS13D-211ENST00000543710 PCDH9Q9HC56 1237 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms