RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SPATA31C2B4DYI2 1134 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 RAMP2O60895 175 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PPFIA2O75334 1257 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM228BP0C875 321 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 NDUFV1P49821 464 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CRYBB1P53674 252 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 LONRF1Q17RB8 773 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SPDYE7PQ495Y7 208 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 UGT3A1Q6NUS8 523 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PHACTR4Q8IZ21 702 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 SNX31Q8N9S9 440 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TMA16Q96EY4 203 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 MS4A14Q96JA4 679 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 PNMA5Q96PV4 448 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 BARD1Q99728 777 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ELAC2Q9BQ52 826 aaKnown RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TRIM51Q9BSJ1 452 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ADGRE3Q9BY15 652 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 IRX2Q9BZI1 471 aaPredicted RBP7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CARD9Q9H257 536 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 TASP1Q9H6P5 420 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 GPATCH2LQ9NWQ4 482 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 ST3GAL5Q9UNP4 418 aa7.13□□□□□ -1.27
SRGAP1-206ENST00000543397 CDH16O75309 829 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MAFO75444 373 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PSMD10O75832 226 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SCNN1AP37088 669 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TMEM119Q4V9L6 283 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 CCDC138Q96M89 665 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GBP5Q96PP8 586 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ATP13A1Q9HD20 1204 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ASAH2Q9NR71 780 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 EMC3Q9P0I2 261 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TRAF3IP3Q9Y228 551 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TNFSF13BQ9Y275 285 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SUPT3HB4E1H0 165 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 F8VZ95 297 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ZBTB39O15060 712 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PLA2G6O60733 806 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SUPT3HO75486 399 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TOMM70O94826 608 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 NUP62P37198 522 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SCNN1BP51168 640 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PRKCQQ04759 706 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SGCGQ13326 291 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MTM1Q13496 603 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 USP41Q3LFD5 358 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 EARS2Q5JPH6 523 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PKN3Q6P5Z2 889 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TRMT10CQ7L0Y3 403 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ZDHHC17Q8IUH5 632 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 KLHL23Q8NBE8 558 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF606Q8WXB4 792 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 STAMBPL1Q96FJ0 436 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TRMT6Q9UJA5 497 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 DCTN4Q9UJW0 460 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 USP18Q9UMW8 372 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GOLGA8RI6L899 631 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 CD44P16070 742 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GLRA2P23416 452 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 KCNJ1P48048 391 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GCNT1Q02742 428 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ABRAQ8N0Z2 381 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TATDN2Q93075 761 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 E2F7Q96AV8 911 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 OTUB1Q96FW1 271 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 GAS2L1Q99501 681 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PDGFCQ9NRA1 345 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 NCKAP1Q9Y2A7 1128 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 HES2Q9Y543 173 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MRC1P22897 1456 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TSPAN3O60637 253 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SPAG7O75391 227 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 JCHAINP01591 159 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ATP5BP06576 529 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 OR1E1P30953 314 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MKRN4PQ13434 485 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 HIST2H2ACQ16777 129 aaPredicted RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 AGAP9Q5VTM2 703 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 HIST2H2AA3Q6FI13 130 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ERAP2Q6P179 960 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 RAD9BQ6WBX8 426 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC47A2Q86VL8 602 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 JAMLQ86YT9 394 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PPIL6Q8IXY8 311 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PPTC7Q8NI37 304 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 WDR24Q96S15 920 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 NFKBIZQ9BYH8 718 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 OSGEPL1Q9H4B0 414 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TRABDQ9H4I3 376 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 MRPL40Q9NQ50 206 aaKnown RBP7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PSD3Q9NYI0 1048 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC39A10Q9ULF5 831 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 PHLPP1O60346 1717 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 TBC1D3BA6NDS4 549 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 USP27XA6NNY8 438 aa7.12□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF185O15231 689 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms