RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 THAP12O43422 761 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 TSPAN9O75954 239 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 MYCP01106 439 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 FYNP06241 537 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 NR3C2P08235 984 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 KRT5P13647 590 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 CPA3P15088 417 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 PHKA2P46019 1235 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 KDSRQ06136 332 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 CALCOCO2Q13137 446 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 SPARCL1Q14515 664 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 PHKG1Q16816 387 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 TRIM16LQ309B1 348 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 MTERF2Q49AM1 385 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 UGT2A3Q6UWM9 527 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 ZNF410Q86VK4 478 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 LRRC49Q8IUZ0 686 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 ERI1Q8IV48 349 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 ESX1Q8N693 406 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 BSNDQ8WZ55 320 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 SERPINB12Q96P63 405 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 PANX3Q96QZ0 392 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 ROPN1BQ9BZX4 212 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 ROPN1Q9HAT0 212 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 CAPN8A6NHC0 703 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 PSMD11O00231 422 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 VWA5AO00534 786 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 MTRF1O75570 445 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 IFNA8P32881 189 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 RABGAP1LQ5R372 815 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 OR7G1Q8NGA0 311 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
CDH4-201ENST00000543233 IRF2BPLQ9H1B7 796 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 KMT5AQ9NQR1 393 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 PXMP2Q9NR77 195 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 DMAC2Q9NW81 257 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 COG5Q9UP83 839 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 UBIAD1Q9Y5Z9 338 aa11.7□□□□□ -0.54
CDH4-201ENST00000543233 J3QRK9 145 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NFKBIEO00221 500 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 POLR2EP19388 210 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 PIK3CAP42336 1068 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NPTX2P47972 431 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 OASLQ15646 514 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 CNGA3Q16281 694 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 SEZ6Q53EL9 994 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NIPAL1Q6NVV3 410 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 B3GNT9Q6UX72 402 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NT5DC3Q86UY8 548 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 FBXL8Q96CD0 374 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 PLEKHA8Q96JA3 519 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 RBM38Q9H0Z9 239 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 MARCH7Q9H992 704 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 GINM1Q9NU53 330 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 SLC38A7Q9NVC3 462 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 EDF1O60869 148 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 STAM2O75886 525 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 C6orf222P0C671 652 aaPredicted RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 RARGP13631 454 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 CA4P22748 312 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NUP107P57740 925 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 PSMC5P62195 406 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 DMP1Q13316 513 aaPredicted RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 SNRNP35Q16560 246 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 TRMT5Q32P41 509 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 OTOAQ7RTW8 1153 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 CCDC105Q8IYK2 499 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 C4orf33Q8N1A6 199 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 RFWD2Q8NHY2 731 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 SEC14L1Q92503 715 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 AGPAT1Q99943 283 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 FAM213AQ9BRX8 229 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 CYLDQ9NQC7 956 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 MAN1C1Q9NR34 630 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 PGAP2Q9UHJ9 254 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
CDH4-201ENST00000543233 C2orf71A6NGG8 1288 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 CES2O00748 559 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 AQP9O43315 295 aa11.69□□□□□ -0.54
CDH4-201ENST00000543233 PHF2O75151 1096 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms