RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SLC10A3P09131 477 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 ESRRAP11474 423 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 MAP7D3Q8IWC1 876 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 OSBPL1AQ9BXW6 950 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 USP29Q9HBJ7 922 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 TNFSF13BQ9Y275 285 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 KCNN4O15554 427 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 C1QAP02745 245 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 SNRPAP09012 282 aaKnown RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 VDRP11473 427 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 PDGFRAP16234 1089 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 LGSNQ5TDP6 509 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 C1orf228Q6PIY5 440 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 PPM1NQ8N819 430 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 RXFP2Q8WXD0 754 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 PRR11Q96HE9 360 aaPredicted RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 MMADHCQ9H3L0 296 aaPredicted RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 CYP3A43Q9HB55 503 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 MGAMO43451 1857 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 PEX10O60683 326 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 ATICP31939 592 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 KRT81Q14533 505 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 CCDC6Q16204 474 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 MUM1Q2TAK8 710 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 FAM91A1Q658Y4 838 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 TRIM42Q8IWZ5 723 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 GPR20Q99678 358 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 KLC2Q9H0B6 622 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 TAS2R1Q9NYW7 299 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
KDM2B-216ENST00000543025 ZC3H7BQ9UGR2 993 aaKnown RBP17.23■□□□□ 0.35
KDM2B-216ENST00000543025 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
KDM2B-216ENST00000543025 I3L4J1 428 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 TRDMT1O14717 391 aaKnown RBP17.22■□□□□ 0.35
KDM2B-216ENST00000543025 LGR5O75473 907 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 GJB1P08034 283 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 P4HA1P13674 534 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 OSBPP22059 807 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 PDK2Q15119 407 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 CDO1Q16878 200 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 C15orf59Q2T9L4 293 aaPredicted RBP17.22■□□□□ 0.35
KDM2B-216ENST00000543025 ANO7Q6IWH7 933 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 RINLQ6ZS11 566 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 PLD5Q8N7P1 536 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 UBA3Q8TBC4 463 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 APBB2Q92870 758 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 MIS12Q9H081 205 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 VRTNQ9H8Y1 702 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 POPDC2Q9HBU9 364 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 PLLPQ9Y342 182 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 FAM237BA0A1B0GVD1 139 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 A6NHS1 94 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 LACTBL1A8MY62 500 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 BTBD19C9JJ37 291 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 FCHO1O14526 889 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 TGM2P21980 687 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 PRKCHP24723 683 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 GCKP35557 465 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 VHLP40337 213 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 MBTD1Q05BQ5 628 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 ACSBG2Q5FVE4 666 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 JADE1Q6IE81 842 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 OR6B2Q6IFH4 312 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 TRNP1Q6NT89 227 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 C7orf26Q96N11 449 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 KCNK4Q9NYG8 393 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
KDM2B-216ENST00000543025 ARIH2O95376 493 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 ZBED1O96006 694 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 RBL1P28749 1068 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
KDM2B-216ENST00000543025 MRPS35P82673 323 aaKnown RBP17.21■□□□□ 0.35
KDM2B-216ENST00000543025 KPNB1Q14974 876 aaKnown RBP17.21■□□□□ 0.35
KDM2B-216ENST00000543025 RCN1Q15293 331 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 RAB6CQ53S08 254 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 ATG16L1Q676U5 607 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 FAM183BPQ6ZVS7 135 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 TTC7BQ86TV6 843 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 NCAPG2Q86XI2 1143 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 NMUR2Q9GZQ4 415 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.35
KDM2B-216ENST00000543025 HEY1Q9Y5J3 304 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms