RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	PML	P29590	882 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	HNRNPH3	P31942	346 aa	Known RBP	12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	NR1H3	Q13133	447 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	MTFR1	Q15390	333 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	HIF1A	Q16665	826 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	TMEM63B	Q5T3F8	832 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	RUBCN	Q92622	972 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	PABPC5	Q96DU9	382 aa	Known RBP	12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	FBXL18	Q96ME1	805 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	MRPL45	Q9BRJ2	306 aa	Known RBP	12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	ATXN3L	Q9H3M9	355 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	ACP6	Q9NPH0	428 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	TXNDC9	O14530	226 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	CLCNKB	P51801	687 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	ACAP1	Q15027	740 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	SYCP2L	Q5T4T6	812 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	PDZD8	Q8NEN9	1154 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	TRAIP	Q9BWF2	469 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	POPDC2	Q9HBU9	364 aa		12.85	□□□□□ -0.35
ABCB8-222	ENST00000542328	IGKV6-21	A0A0C4DH24	114 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	BAG2	O95816	211 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	PFKM	P08237	780 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	OR1D2	P34982	312 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	TBX4	P57082	545 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	LILRA4	P59901	499 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	LRRC14	Q15048	493 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	P3H1	Q32P28	736 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	MYLK4	Q86YV6	388 aa	Predicted RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	LAMB1	P07942	1786 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	NEMP1	O14524	444 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	PBX1	P40424	430 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	TMPRSS15	P98073	1019 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	CDH18	Q13634	790 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	BYSL	Q13895	437 aa	Known RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	FUT10	Q6P4F1	479 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	ZNF449	Q6P9G9	518 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	FAM35A	Q86V20	835 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	VPS39	Q96JC1	886 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	ERP44	Q9BS26	406 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	VIPAS39	Q9H9C1	493 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	ABCC13	Q9NSE7	274 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	COQ4	Q9Y3A0	265 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	FIS1	Q9Y3D6	152 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328		F8VP50	259 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	SYN3	O14994	580 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	PSMD3	O43242	534 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	USP17L7	P0C7H9	530 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	CENPC	Q03188	943 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	WDR59	Q6PJI9	974 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	ANKMY2	Q8IV38	441 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	HERC6	Q8IVU3	1022 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	ARHGEF26	Q96DR7	871 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	BCAP29	Q9UHQ4	241 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	G3BP2	Q9UN86	482 aa	Known RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	PAPPA2	Q9BXP8	1791 aa		12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	DDX60L	Q5H9U9	1706 aa	Known RBP	12.84	□□□□□ -0.35
ABCB8-222	ENST00000542328	APRT	P07741	180 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	NOS2	P35228	1153 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	SESN3	P58005	492 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	FMO1	Q01740	532 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	OR2W6P	Q8NHA6	318 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	EXD1	Q8NHP7	514 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	MAML1	Q92585	1016 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	ADAM33	Q9BZ11	813 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	VCX3B	Q9H321	246 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	DYRK4	Q9NR20	520 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	TELO2	Q9Y4R8	837 aa		12.83	□□□□□ -0.35
ABCB8-222	ENST00000542328	LAMA4	Q16363	1823 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	GMNC	A6NCL1	334 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	LRRC37A	A6NMS7	1700 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328		H0Y626	953 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PMM2	O15305	246 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PJA2	O43164	708 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	CILP	O75339	1184 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	CAPN15	O75808	1086 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	ITIH2	P19823	946 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PSEN1	P49768	467 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	KPNA2	P52292	529 aa	Known RBP	12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	LPIN1	Q14693	890 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	MMEL1	Q495T6	779 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	KCNT1	Q5JUK3	1230 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PAPD7	Q5XG87	772 aa	Known RBP	12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	LRRC15	Q8TF66	581 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	ATP6V1E2	Q96A05	226 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	ACSF2	Q96CM8	615 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PPP1R2P1	Q96PQ5	205 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PNKP	Q96T60	521 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	VPS11	Q9H270	941 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	PCDHB8	Q9UN66	801 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	IGFBP4	P22692	258 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	COPS2	P61201	443 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	NOMO3	P69849	1222 aa		12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCB8-222	ENST00000542328	IRF2BP2	Q7Z5L9	587 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms