RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 COMMD8Q9NX08 183 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 DDX56Q9NY93 547 aaKnown RBP9.67□□□□□ -0.86
LDHA-220ENST00000542179 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.67□□□□□ -0.86
LDHA-220ENST00000542179 IL37Q9NZH6 218 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 USTQ9Y2C2 406 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 PCDHB12Q9Y5F1 795 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 SLC4A7Q9Y6M7 1214 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 PATJQ8NI35 1801 aa9.67□□□□□ -0.86
LDHA-220ENST00000542179 COL4A4P53420 1690 aaPredicted RBP9.67□□□□□ -0.86
LDHA-220ENST00000542179 MTMR11A4FU01 709 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 CCDC188H7C350 402 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 PGRMC1O00264 195 aaKnown RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 GRAP2O75791 330 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 ABLIM3O94929 683 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 ZRANB2O95218 330 aaKnown RBP eCLIP9.66□□□□□ -0.86
LDHA-220ENST00000542179 VNN2O95498 520 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 ZBED1O96006 694 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 HAPLN1P10915 354 aaPredicted RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 PYGMP11217 842 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 CPB1P15086 417 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 SYN1P17600 705 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 DESP17661 470 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 NOS2P35228 1153 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 PTPN7P35236 360 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 GLUD2P49448 558 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 RNASE9P60153 205 aaKnown RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 SLC25A11Q02978 314 aaKnown RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 KRT17Q04695 432 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 PSMD5Q16401 504 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 SLC25A52Q3SY17 297 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 KIAA1841Q6NSI8 718 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 PRSS55Q6UWB4 352 aaPredicted RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 STRADAQ7RTN6 431 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 GPRIN1Q7Z2K8 1008 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 BNIPLQ7Z465 357 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 DEFB106AQ8N104 65 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 NUP93Q8N1F7 819 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 MMGT1Q8N4V1 131 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 LRRN4CLQ8ND94 238 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 UBXN4Q92575 508 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 GOLGA1Q92805 767 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 ULBP1Q9BZM6 244 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 POPDC2Q9HBU9 364 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.66□□□□□ -0.862e-11■■□□□ 12.5
LDHA-220ENST00000542179 ABI2Q9NYB9 513 aaPredicted RBP9.66□□□□□ -0.86
LDHA-220ENST00000542179 RRN3Q9NYV6 651 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 MAFFQ9ULX9 164 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 SSX2IPQ9Y2D8 614 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 CDY1Q9Y6F8 540 aa9.66□□□□□ -0.86
LDHA-220ENST00000542179 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FAM92AA1XBS5 289 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 YJEFN3A6XGL0 299 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 E7ENQ6 273 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FSCN2O14926 492 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 LILRB3O75022 631 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 ZMYND10O75800 440 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FGF18O76093 207 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TRUB2O95900 331 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 FGGP02679 453 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FYNP06241 537 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 UQCRHP07919 91 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 USP17L7P0C7H9 530 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 MIPP30301 263 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 CETN2P41208 172 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TUFMP49411 452 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 RPL10AP62906 217 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 ROR1Q01973 937 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 CREMQ03060 361 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 ZNF211Q13398 564 aaPredicted RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 RAB33AQ14088 237 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 PPP2R5EQ16537 467 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 BOLA3Q53S33 107 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 SEL1L2Q5TEA6 688 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 DAB2IPQ5VWQ8 1189 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TPGS2Q68CL5 300 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 BHLHA9Q7RTU4 235 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 SLC13A5Q86YT5 568 aaPredicted RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 ATAD1Q8NBU5 361 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 CMASQ8NFW8 434 aaPredicted RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TEKT4Q8WW24 435 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 DPF3Q92784 378 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 PGAP3Q96FM1 320 aaPredicted RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 RBM41Q96IZ5 413 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 CFAP57Q96MR6 1250 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 PGLYRP2Q96PD5 576 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TBCBQ99426 244 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 NPY6RQ99463 290 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 CLSTN3Q9BQT9 956 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FBXO44Q9H4M3 255 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 RXFP1Q9HBX9 757 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 TMEM51Q9NW97 253 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 FNIP2Q9P278 1114 aa9.65□□□□□ -0.86
LDHA-220ENST00000542179 AFF4Q9UHB7 1163 aaKnown RBP9.65□□□□□ -0.86
LDHA-220ENST00000542179 ZMYND8Q9ULU4 1186 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms