RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 CDK5RAP1Q96SZ6 601 aaKnown RBP23.22■■□□□ 1.31
C2CD3-216ENST00000541922 PNKPQ96T60 521 aa23.22■■□□□ 1.31
C2CD3-216ENST00000541922 CLSTN2Q9H4D0 955 aa23.22■■□□□ 1.31
C2CD3-216ENST00000541922 LSM7Q9UK45 103 aaKnown RBP23.22■■□□□ 1.31
C2CD3-216ENST00000541922 XPO1O14980 1071 aaKnown RBP23.21■■□□□ 1.31
C2CD3-216ENST00000541922 MDM4O15151 490 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 PAEPP09466 180 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 HOXC13P31276 330 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 EIF2DP41214 584 aaKnown RBP23.21■■□□□ 1.31
C2CD3-216ENST00000541922 PLA2G4AP47712 749 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 SLC6A11P48066 632 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 BST2Q10589 180 aaKnown RBP23.21■■□□□ 1.31
C2CD3-216ENST00000541922 BTBD8Q5XKL5 378 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 CREBRFQ8IUR6 639 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 DCLK2Q8N568 766 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 SPHK2Q9NRA0 654 aa23.21■■□□□ 1.31
C2CD3-216ENST00000541922 EP300Q09472 2414 aaPredicted RBP23.2■■□□□ 1.3
C2CD3-216ENST00000541922 OTOGLQ3ZCN5 2332 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.2■■□□□ 1.3
C2CD3-216ENST00000541922 O00370 1275 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 TKTL1P51854 596 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 SIM2Q14190 667 aaPredicted RBP23.2■■□□□ 1.3
C2CD3-216ENST00000541922 PRR23BQ6ZRT6 265 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 RRAGAQ7L523 313 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 SYT13Q7L8C5 426 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 WDR5BQ86VZ2 330 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 C12orf40Q86WS4 652 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 CAMKK1Q8N5S9 505 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 MLKLQ8NB16 471 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 UBA3Q8TBC4 463 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 KAT5Q92993 513 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 LRRC4Q9HBW1 653 aa23.2■■□□□ 1.3
C2CD3-216ENST00000541922 DMDP11532 3685 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 K7EQS6 105 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 TULP2O00295 520 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 HRO43593 1189 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 APODP05090 189 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 SEC13P55735 322 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 GCNT1Q02742 428 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 ANO4Q32M45 955 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 C2orf27AQ580R0 203 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 MIB1Q86YT6 1006 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 ARHGEF19Q8IW93 802 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 USP33Q8TEY7 942 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 ULBP1Q9BZM6 244 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 INTS2Q9H0H0 1204 aaKnown RBP23.19■■□□□ 1.3
C2CD3-216ENST00000541922 ARHGEF4Q9NR80 690 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 POLR3BQ9NW08 1133 aaPredicted RBP23.19■■□□□ 1.3
C2CD3-216ENST00000541922 GMEB2Q9UKD1 530 aa23.19■■□□□ 1.3
C2CD3-216ENST00000541922 CCDC163A0A0D9SF12 145 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 HOXC11O43248 304 aaPredicted RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 GREM1O60565 184 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 KAT7O95251 611 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 ZBED1O96006 694 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 SETSIPP0DME0 302 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 PXNP49023 591 aaPredicted RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 YWHAGP61981 247 aaKnown RBP eCLIP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 KDSRQ06136 332 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 SRSF5Q13243 272 aaKnown RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 DMC1Q14565 340 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 LPAL2Q16609 132 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 LCLAT1Q6UWP7 414 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 RSRC2Q7L4I2 434 aaKnown RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 TMEM25Q86YD3 366 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 KIAA2013Q8IYS2 634 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 NAT16Q8N8M0 369 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 RBBP8NLQ8NC74 664 aaPredicted RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 TFAP2BQ92481 460 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 CNOT6LQ96LI5 555 aaKnown RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 IPO9Q96P70 1041 aaKnown RBP23.18■■□□□ 1.3
C2CD3-216ENST00000541922 HHIPQ96QV1 700 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 RASAL2Q9UJF2 1139 aa23.18■■□□□ 1.3
C2CD3-216ENST00000541922 RNF225M0QZC1 329 aaPredicted RBP23.17■■□□□ 1.3
C2CD3-216ENST00000541922 GRIA2P42262 883 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 COG7P83436 770 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 ADIGQ0VDE8 80 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 EFEMP1Q12805 493 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 STILQ15468 1287 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 TPD52L1Q16890 204 aaPredicted RBP23.17■■□□□ 1.3
C2CD3-216ENST00000541922 PM20D1Q6GTS8 502 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 LAIR1Q6GTX8 287 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 CEP68Q76N32 757 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 SIX6OS1Q8N1H7 587 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 MED15Q96RN5 788 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 NUP62CLQ9H1M0 184 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 GVINP1Q7Z2Y8 2422 aa23.17■■□□□ 1.3
C2CD3-216ENST00000541922 STC2O76061 302 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 MRPS21P82921 87 aaKnown RBP23.16■■□□□ 1.3
C2CD3-216ENST00000541922 MESP2Q0VG99 397 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 CNGA2Q16280 664 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 PREPLQ4J6C6 727 aaPredicted RBP23.16■■□□□ 1.3
C2CD3-216ENST00000541922 PKDCCQ504Y2 493 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 CLEC17AQ6ZS10 378 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 ETFBKMTQ8IXQ9 262 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 KCTD13Q8WZ19 329 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 KREMEN1Q96MU8 473 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 MARCH2Q9P0N8 246 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 DEC1Q9P2X7 70 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 STRIP2Q9ULQ0 834 aa23.16■■□□□ 1.3
C2CD3-216ENST00000541922 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms