RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 DNAJB11Q9UBS4 358 aa3.99□□□□□ -1.77
CUL3-214ENST00000541548 USP22Q9UPT9 525 aa3.99□□□□□ -1.77
CUL3-214ENST00000541548 HPSEQ9Y251 543 aa3.99□□□□□ -1.77
CUL3-214ENST00000541548 C16orf96A6NNT2 1141 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 KPNA5O15131 536 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 USP1O94782 785 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 IL18RAPO95256 599 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 CREB1P16220 341 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 TPH1P17752 444 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 MST1P26927 711 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 RBL1P28749 1068 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 PRKAR1BP31321 381 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 CFHR1Q03591 330 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 STK3Q13188 491 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 ETFDHQ16134 617 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 SRSF7Q16629 238 aaKnown RBP eCLIP3.98□□□□□ -1.77
CUL3-214ENST00000541548 ABLIM2Q6H8Q1 611 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 KIAA0408Q6ZU52 694 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 PIP4P1Q86T03 277 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.98□□□□□ -1.77
CUL3-214ENST00000541548 C11orf44Q8N8P7 122 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
CUL3-214ENST00000541548 MBD3L2Q8NHZ7 208 aaPredicted RBP3.98□□□□□ -1.77
CUL3-214ENST00000541548 EFHD1Q9BUP0 239 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 GATA5Q9BWX5 397 aaPredicted RBP3.98□□□□□ -1.77
CUL3-214ENST00000541548 NAA15Q9BXJ9 866 aaKnown RBP3.98□□□□□ -1.77
CUL3-214ENST00000541548 NUP62CLQ9H1M0 184 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 MLXIPLQ9NP71 852 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 VPS45Q9NRW7 570 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 MYO1AQ9UBC5 1043 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 ZNF212Q9UDV6 495 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 CCNL1Q9UK58 526 aaPredicted RBP3.98□□□□□ -1.77
CUL3-214ENST00000541548 ITGB1BP2Q9UKP3 347 aa3.98□□□□□ -1.77
CUL3-214ENST00000541548 WDR17Q8IZU2 1322 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 OR2W5A6NFC9 320 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 BTBD19C9JJ37 291 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 RGS10O43665 173 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 TMPRSS11DO60235 418 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 MOSPD3O75425 235 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 TRIM27P14373 513 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 FGFR2P21802 821 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 ATP5F1P24539 256 aaPredicted RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 ARHGAP25P42331 645 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 TM4SF4P48230 202 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 COPB1P53618 953 aaKnown RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 SUMO2P61956 95 aaKnown RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 ACOX1Q15067 660 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 Q4G0T1 1027 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 AASDHQ4L235 1098 aaPredicted RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 RRAGBQ5VZM2 374 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 RAB11FIP4Q86YS3 637 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 LIX1LQ8IVB5 337 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 SUN3Q8TAQ9 357 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 TTC17Q96AE7 1141 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 ZNF668Q96K58 619 aaPredicted RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 COLEC11Q9BWP8 271 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 SPRTNQ9H040 489 aaPredicted RBP3.97□□□□□ -1.77
CUL3-214ENST00000541548 FZD4Q9ULV1 537 aa3.97□□□□□ -1.77
CUL3-214ENST00000541548 POM121BA6NF01 834 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 PMM2O15305 246 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 CA12O43570 354 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 PQBP1O60828 265 aaKnown RBP3.96□□□□□ -1.78
CUL3-214ENST00000541548 GABRB3P28472 473 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 TBX4P57082 545 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 CFHR3Q02985 330 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 DNASE1L3Q13609 305 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 CRTC1Q6UUV9 634 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 ATP11CQ8NB49 1132 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 ADAMTS18Q8TE60 1221 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 MAP4K1Q92918 833 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 FYTTD1Q96QD9 318 aaKnown RBP3.96□□□□□ -1.78
CUL3-214ENST00000541548 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 TBC1D23Q9NUY8 699 aa3.96□□□□□ -1.78
CUL3-214ENST00000541548 RHPN2P1A8MT19 583 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 PSMD9O00233 223 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 FOXN3O00409 490 aaPredicted RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 AREL1O15033 823 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 NCK2O43639 380 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 INMTO95050 263 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 ADRA1DP25100 572 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 HOXD9P28356 352 aaPredicted RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 ATICP31939 592 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 GNALP38405 381 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 PBX1P40424 430 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 EIF4A1P60842 406 aaKnown RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 SRSF1Q07955 248 aaKnown RBP eCLIP3.95□□□□□ -1.78
CUL3-214ENST00000541548 FAM90A2PQ658T7 463 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 DCDC5Q6ZRR9 648 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 C12orf76Q8N812 135 aaPredicted RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 SMG7Q92540 1137 aaKnown RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 RPL36ALQ969Q0 106 aaKnown RBP3.95□□□□□ -1.78
CUL3-214ENST00000541548 IQCDQ96DY2 449 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 SLC29A3Q9BZD2 475 aa3.95□□□□□ -1.78
CUL3-214ENST00000541548 SLC25A32Q9H2D1 315 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms