RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 DNALI1O14645 258 aaPredicted RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 CHMP2AO43633 222 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 FAM155BO75949 473 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 PROSCO94903 275 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 SLITRK3O94933 977 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 IVDP26440 423 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 HOXC8P31273 242 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 PEX19P40855 299 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 NSFP46459 744 aaKnown RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 SERPINB4P48594 390 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 GATMP50440 423 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 SLC26A2P50443 739 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 CYP2J2P51589 502 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 ZBTB16Q05516 673 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 CBLBQ13191 982 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 LPIN1Q14693 890 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 CLEC16AQ2KHT3 1053 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 TIGD5Q53EQ6 642 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 LRRC23Q53EV4 343 aaPredicted RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 TRIM68Q6AZZ1 485 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 ANO7Q6IWH7 933 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 C4orf22Q6V702 233 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 NLRP9Q7RTR0 991 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 NET1Q7Z628 596 aaPredicted RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 TMPRSS6Q8IU80 811 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 CCDC60Q8IWA6 550 aaPredicted RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 ST13P4Q8IZP2 240 aaPredicted RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 GDAP1Q8TB36 358 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 TRAPPC12Q8WVT3 735 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
CHFR-219ENST00000541341 IP6K2Q9UHH9 426 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 COMMD3-BMI1R4GMX3 469 aa10.84□□□□□ -0.67
CHFR-219ENST00000541341 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 STBD1O95210 358 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 LINGO3P0C6S8 592 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ESRRAP11474 423 aaPredicted RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 GNAT1P11488 350 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 PLS3P13797 630 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CYP11B1P15538 503 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 LTBRP36941 435 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 QARSP47897 775 aaKnown RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 RPS6KA3P51812 740 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 RAP1GDS1P52306 607 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ARFIP2P53365 341 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ARL4CP56559 192 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 PSMC5P62195 406 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 HYAL1Q12794 435 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 TMED2Q15363 201 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 GRIK4Q16099 956 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 SLC5A9Q2M3M2 681 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CBWD6Q4V339 395 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CBWD3Q5JTY5 395 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CBWD5Q5RIA9 395 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 FAM160B1Q5W0V3 765 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 TPH2Q8IWU9 490 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 OLIG1Q8TAK6 271 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 C10orf82Q8WW14 230 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 JADE3Q92613 823 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 KRT35Q92764 455 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 DYDC2Q96IM9 177 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 RMDN2Q96LZ7 410 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ZNF184Q99676 751 aaPredicted RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 DDX23Q9BUQ8 820 aaKnown RBP10.83□□□□□ -0.68
CHFR-219ENST00000541341 RUSC1Q9BVN2 902 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 C1orf21Q9H246 121 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 SMARCAD1Q9H4L7 1026 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 Q9H521 79 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 AAASQ9NRG9 546 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CIDEBQ9UHD4 219 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 HAO1Q9UJM8 370 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 ANAPC7Q9UJX3 599 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CHKBQ9Y259 395 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 NEU2Q9Y3R4 380 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 CDY2AQ9Y6F7 541 aa10.83□□□□□ -0.68
CHFR-219ENST00000541341 SMIM31A0A1B0GVY4 71 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 DPPA5A6NC42 116 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 I3L4J1 428 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 K7ENM7 598 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 ENPP3O14638 875 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 CLDN3O15551 220 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 CREB3O43889 395 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 ZNF862O60290 1169 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 PENKP01210 267 aaPredicted RBP10.82□□□□□ -0.68
CHFR-219ENST00000541341 ITGAVP06756 1048 aa10.82□□□□□ -0.68
CHFR-219ENST00000541341 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms