RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FAM47DPA6NHR8 397 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 MAGEB2O15479 319 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 NPTXRO95502 500 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 WEE2P0C1S8 567 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 GAD2Q05329 585 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 RHBDF2Q6PJF5 856 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 MTDHQ86UE4 582 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 C12orf50Q8NA57 414 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 MFSD14AQ96MC6 490 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ZFP42Q96MM3 310 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 TMEM109Q9BVC6 243 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 UBN1Q9NPG3 1134 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 A0A1W2PPM1 405 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 CAPN9O14815 690 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 GTF2H1P32780 548 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 WDR4P57081 412 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 MDH1BQ5I0G3 518 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ZBTB8OSQ8IWT0 167 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 TEX9Q8N6V9 391 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 GBP7Q8N8V2 638 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ARRDC4Q8NCT1 418 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 GBP5Q96PP8 586 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 IMPG2Q9BZV3 1241 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 GOLGA2P5Q9HBQ8 144 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 NPHS2Q9NP85 383 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 PCSK1NQ9UHG2 260 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 ST3GAL5Q9UNP4 418 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 NUB1Q9Y5A7 615 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 NUMBLQ9Y6R0 609 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 RPS6KL1Q9Y6S9 549 aa14.92□□□□□ -0.02
SFSWAP-210ENST00000541286 CKBP12277 381 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 TAC1P20366 129 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 GSTT1P30711 240 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 MAN1A1P33908 653 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 RPA3P35244 121 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 NEK3P51956 506 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 NRLP54845 237 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 CUL2Q13617 745 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 KPNB1Q14974 876 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 ZNF513Q8N8E2 541 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 TMC2Q8TDI7 906 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 CDT1Q9H211 546 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 PDZD7Q9H5P4 517 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 SNTG2Q9NY99 539 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 NXF1Q9UBU9 619 aaKnown RBP14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 PHTF1Q9UMS5 762 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 COQ4Q9Y3A0 265 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 FRMPD3Q5JV73 1810 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 RRN3P2A6NIE6 340 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 PIK3R2O00459 728 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 ABLIM1O14639 778 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 T-ENOLP0DO92 83 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 SLC1A1P43005 524 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 GCNT1Q02742 428 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 DEUP1Q05D60 604 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 EFTUD2Q15029 972 aaKnown RBP eCLIP14.91□□□□□ -0.022e-10■■□□□ 12.8
SFSWAP-210ENST00000541286 FAM117BQ6P1L5 589 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 WASF2Q9Y6W5 498 aa14.91□□□□□ -0.02
SFSWAP-210ENST00000541286 ARVCFO00192 962 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 DARSP14868 501 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 CST5P28325 142 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 SSTR1P30872 391 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 PHKA2P46019 1235 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 BPIFB4P59827 614 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 PDCD2Q16342 344 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 OR52E8Q6IFG1 317 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 DNAJC24Q6P3W2 148 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 PRR11Q96HE9 360 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 CFAP57Q96MR6 1250 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 FZD8Q9H461 694 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 SMIM35A0A1B0GVV1 85 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 CSPG5O95196 566 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 KRT19P08727 400 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 MRPS6P82932 125 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 GPNMBQ14956 572 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 CCNG2Q16589 344 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 BBS9Q3SYG4 887 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 SESTD1Q86VW0 696 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 FEZF2Q8TBJ5 459 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 SLC7A6OSQ96CW6 309 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 VCXQ9H320 206 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 SYNCQ9H7C4 482 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 TXLNGQ9NUQ3 528 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 PRKAG3Q9UGI9 489 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 A0A0G2JND7 137 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 BAG2O95816 211 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 HOXC8P31273 242 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 GATMP50440 423 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 NOMO3P69849 1222 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 TFAMQ00059 246 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 STAT4Q14765 748 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 TWF2Q6IBS0 349 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 MON1BQ7L1V2 547 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 FAM81BQ96LP2 452 aa14.9□□□□□ -0.02
SFSWAP-210ENST00000541286 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms