RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 EPS8Q12929 822 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 DCUN1D1Q96GG9 259 aa15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 PRMT7Q9NVM4 692 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 TUBA8Q9NY65 449 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMARCA4-207ENST00000541122 NR5A2O00482 541 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 STX7O15400 261 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ADRA1DP25100 572 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 MAPK1P28482 360 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ALDH1A3P47895 512 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 NCALDP61601 193 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 MPP3Q13368 585 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 TRIM25Q14258 630 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 AARS2Q5JTZ9 985 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 SP8Q8IXZ3 490 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 STN1Q9H668 368 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 DNAJC18Q9H819 358 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ANKRD6Q9Y2G4 727 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 TPRKBQ9Y3C4 175 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 VWA5AO00534 786 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ENTPD3O75355 529 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 CAMTA2O94983 1202 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 VDRP11473 427 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 MAPRE1Q15691 268 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 IER5Q5VY09 327 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 PLA2G4FQ68DD2 849 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 PKN3Q6P5Z2 889 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 KDELC2Q7Z4H8 507 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 DIS3LQ8TF46 1054 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 GAS2O43903 313 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 HNRNPH3P31942 346 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 SOX11P35716 441 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 FUT11Q495W5 492 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 STKLD1Q8NE28 680 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 RORBQ92753 470 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 CGRRF1Q99675 332 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 CYLDQ9NQC7 956 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 RRN3Q9NYV6 651 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 KLHL3Q9UH77 587 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 TMCO1Q9UM00 188 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 MEI4A8MW99 385 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ANPEPP15144 967 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 ATP6V1B2P21281 511 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 MMP13P45452 471 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 DGKDQ16760 1214 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 TMEM119Q4V9L6 283 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 HDDC2Q7Z4H3 204 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 OMA1Q96E52 524 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 APOL4Q9BPW4 351 aa15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.41■□□□□ 0.066e-8■■■■□ 22.5
SMARCA4-207ENST00000541122 RSL24D1Q9UHA3 163 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-207ENST00000541122 C15orf38-AP3S2A0A0A6YYH1 394 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SREBF1P36956 1147 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 BMPR2Q13873 1038 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 TRIP4Q15650 581 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 ATP6AP1LQ52LC2 224 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 HHIPL2Q6UWX4 724 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 ARPINQ7Z6K5 226 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC47A2Q86VL8 602 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 IQCKQ8N0W5 287 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 OR8H2Q8N162 312 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 ARMCX1Q9P291 453 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 NCANO14594 1321 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 TOP3AQ13472 1001 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 ABRAQ8N0Z2 381 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SEPT1Q8WYJ6 367 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 NSMCE2Q96MF7 247 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 POLE3Q9NRF9 147 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 PRPF4O43172 522 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 CCDC130P13994 396 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 TKTP29401 623 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 KCNT1Q5JUK3 1230 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 THEMIS2Q5TEJ8 643 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 HEATR4Q86WZ0 1026 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 CAMK1DQ8IU85 385 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 KCTD10Q9H3F6 313 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 LATS2Q9NRM7 1088 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 C6orf203Q9P0P8 240 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 FAM95CA0A1B0GW59 222 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SV2CQ496J9 727 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 CWF19L1Q69YN2 538 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 TSPAN14Q8NG11 270 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC7A14Q8TBB6 771 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 UBA3Q8TBC4 463 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC25A23Q9BV35 468 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 USP18Q9UMW8 372 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 FAM205AQ6ZU69 1335 aa15.4■□□□□ 0.06
SMARCA4-207ENST00000541122 NR3C2P08235 984 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 PSMB9P28065 219 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 AKT1P31749 480 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 COG2Q14746 738 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 NCF4Q15080 339 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 KATNAL2Q8IYT4 538 aa15.39■□□□□ 0.05
SMARCA4-207ENST00000541122 OLFM1Q99784 485 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms