RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 SEZ6LQ9BYH1 1024 aa7.1□□□□□ -1.27
TTR-203ENST00000541025 UPF2Q9HAU5 1272 aaKnown RBP7.1□□□□□ -1.27
TTR-203ENST00000541025 VWA7Q9Y334 891 aa7.1□□□□□ -1.27
TTR-203ENST00000541025 HS3ST3A1Q9Y663 406 aa7.1□□□□□ -1.27
TTR-203ENST00000541025 COL4A4P53420 1690 aaPredicted RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 TRANK1O15050 2925 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 CYP3A7-CYP3A51PA0A087WV96 503 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 IGKV6D-21A0A0A0MT36 114 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 CCDC194A0A1B0GVG4 234 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 A0A1W2PPC1 479 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 SLPIP03973 132 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 IQCF3P0C7M6 154 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 SUPT20HL2P0C7V6 817 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 CKBP12277 381 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 XBP1P17861 261 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 CYP3A7P24462 503 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 KRT2P35908 639 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 IRF9Q00978 393 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 SETQ01105 290 aaPredicted RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 ALDH6A1Q02252 535 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 HGFACQ04756 655 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 PTPROQ16827 1216 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 TRIM71Q2Q1W2 868 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 LETM2Q2VYF4 491 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 TMEM240Q5SV17 173 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 CATSPEREQ5SY80 951 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 ABHD15Q6UXT9 468 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 DDX53Q86TM3 631 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 CCDC60Q8IWA6 550 aaPredicted RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 DIS3L2Q8IYB7 885 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 ETNPPLQ8TBG4 499 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 LMBR1Q8WVP7 490 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 TRAPPC12Q8WVT3 735 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 WASF1Q92558 559 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 EXTL1Q92935 676 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 ATP6V0A1Q93050 837 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 LPPQ93052 612 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 LLPHQ9BRT6 129 aaKnown RBP7.09□□□□□ -1.27
TTR-203ENST00000541025 BOCQ9BWV1 1114 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 SETD4Q9NVD3 440 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 PLA2G3Q9NZ20 509 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 PLAAQ9Y263 795 aa7.09□□□□□ -1.27
TTR-203ENST00000541025 COL6A3P12111 3177 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 C17orf102A2RUQ5 167 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 CHMP2AO43633 222 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 PSMD10O75832 226 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ASLP04424 464 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 SESN2P58004 480 aaPredicted RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 FOXL1Q12952 345 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 PPIGQ13427 754 aaKnown RBP eCLIP7.08□□□□□ -1.28
TTR-203ENST00000541025 PLCB4Q15147 1175 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 UGCGQ16739 394 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 TCTN1Q2MV58 587 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 Q4G0T1 1027 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 MARCH8Q5T0T0 291 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ZNF618Q5T7W0 954 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 LRCH2Q5VUJ6 765 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 FAM109BQ6ICB4 259 aaPredicted RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 FSTL4Q6MZW2 842 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ZCCHC8Q6NZY4 707 aaKnown RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 MOXD1Q6UVY6 613 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 B3GNT9Q6UX72 402 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ZNF365Q70YC5 407 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 DEFB128Q7Z7B8 93 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 NEK8Q86SG6 692 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ADGRE4PQ86SQ3 457 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 SERINC5Q86VE9 423 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 TMEM199Q8N511 208 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 HAS1Q92839 578 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 GLG1Q92896 1179 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 SLC5A5Q92911 643 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 C8orf76Q96K31 380 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 PCED1AQ9H1Q7 454 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 UNC45AQ9H3U1 944 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 SMARCAD1Q9H4L7 1026 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 ERAP1Q9NZ08 941 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 DDX25Q9UHL0 483 aaKnown RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 ZNF215Q9UL58 517 aaPredicted RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 FNDC1Q4ZHG4 1894 aaPredicted RBP7.08□□□□□ -1.28
TTR-203ENST00000541025 MYH11P35749 1972 aa7.08□□□□□ -1.28
TTR-203ENST00000541025 IGSF9BQ9UPX0 1349 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 RALGAPA2Q2PPJ7 1873 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 KIF28PB7ZC32 967 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 OPA1O60313 960 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 CCNT1O60563 726 aaKnown RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 GAS7O60861 476 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 NBNO60934 754 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 DNAJC6O75061 913 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 IBSPP21815 317 aaPredicted RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 IGFALSP35858 605 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 THPOP40225 353 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 FNTBP49356 437 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 STAT5BP51692 787 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 GYS2P54840 703 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 IGBP1P78318 339 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 HMGN5P82970 282 aaKnown RBP7.07□□□□□ -1.28
TTR-203ENST00000541025 HHEXQ03014 270 aa7.07□□□□□ -1.28
TTR-203ENST00000541025 PPFIA1Q13136 1202 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms