RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	CCDC96	Q2M329	555 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	TBRG1	Q3YBR2	411 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	CD300E	Q496F6	205 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	LRRC24	Q50LG9	513 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	TMEM196	Q5HYL7	178 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ZNF484	Q5JVG2	852 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	METTL24	Q5JXM2	366 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	RBM20	Q5T481	1227 aa	Known RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	ICE2	Q659A1	982 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ANKRD40	Q6AI12	368 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	DGAT2L7P	Q6IED9	249 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ANO7	Q6IWH7	933 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ATF7IP	Q6VMQ6	1270 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	BRINP3	Q76B58	766 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	B4GALNT4	Q76KP1	1039 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	PLEKHH3	Q7Z736	793 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SGMS1	Q86VZ5	419 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SYT12	Q8IV01	421 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	RHOT2	Q8IXI1	618 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ABRA	Q8N0Z2	381 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	FAM71D	Q8N9W8	422 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	MDGA1	Q8NFP4	955 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	LINS1	Q8NG48	757 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	OR56A1	Q8NGH5	318 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	KCNG4	Q8TDN1	519 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SLC22A17	Q8WUG5	538 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	OSCP1	Q8WVF1	389 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SNX19	Q92543	992 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	CUL5	Q93034	780 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	MCRS1	Q96EZ8	462 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	HAPLN3	Q96S86	360 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	MPHOSPH9	Q99550	1183 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ZSWIM1	Q9BR11	485 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	C17orf80	Q9BSJ5	609 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	DPCD	Q9BVM2	203 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	LMAN2L	Q9H0V9	348 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	PRKRIP1	Q9H875	184 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	SEC61A2	Q9H9S3	476 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	PLEKHA2	Q9HB19	425 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	VEZT	Q9HBM0	779 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	MSL2	Q9HCI7	577 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	EIF2B3	Q9NR50	452 aa	Known RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	ANKEF1	Q9NU02	776 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	FBXO28	Q9NVF7	368 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	TMLHE	Q9NVH6	421 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	NKX1-2	Q9UD57	310 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	STEAP1	Q9UHE8	339 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	EIF2B4	Q9UI10	523 aa	Known RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	VPS51	Q9UID3	782 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	HSF4	Q9ULV5	492 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SUFU	Q9UMX1	484 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SMG5	Q9UPR3	1016 aa	Known RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	SORCS3	Q9UPU3	1222 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	CAMK2A	Q9UQM7	478 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	SLC27A6	Q9Y2P4	619 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	PCDHA10	Q9Y5I2	948 aa		3	□□□□□ -1.93
CARS2-223	ENST00000540785	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	RSF1	Q96T23	1441 aa	Predicted RBP	3	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3D	A0A087WVF3	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3I	A0A087WXS9	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3E	A0A087X179	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3K	A0A087X1G2	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PRAMEF33	A0A0G2JMD5	474 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	CCDC78	A2IDD5	438 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3B	A6NDS4	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3F	A6NER0	549 aa	Predicted RBP	2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	FAM90A20P	A6NIJ5	464 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3L	B9A6J9	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	ADM5	C9JUS6	153 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PSMD9	O00233	223 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	LEFTY2	O00292	366 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PRAMEF10	O60809	474 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	GUCY1B2	O75343	617 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	WDR47	O94967	919 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	CSF1R	P07333	972 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TBC1D3H	P0C7X1	549 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TMEM225B	P0DP42	221 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PRKCH	P24723	683 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PPIF	P30405	207 aa	Known RBP	2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	THBS4	P35443	961 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	HOXD12	P35452	270 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	GGT5	P36269	586 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	ARL3	P36405	182 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	PBX1	P40424	430 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	STAT1	P42224	750 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	CDK7	P50613	346 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	IRAK1	P51617	712 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	RPS7	P62081	194 aa	Known RBP	2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	HHEX	Q03014	270 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	SEMA3B	Q13214	749 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	MPP3	Q13368	585 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	TUBB3	Q13509	450 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	ERV3-1	Q14264	604 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	NFIX	Q14938	502 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	MEA1	Q16626	185 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	LY6K	Q17RY6	165 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	RILPL1	Q5EBL4	403 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	ARTN	Q5T4W7	220 aa		2.99	□□□□□ -1.93
CARS2-223	ENST00000540785	NAA35	Q5VZE5	725 aa		2.99	□□□□□ -1.93

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