RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 COPS2P61201 443 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 GLE1Q53GS7 698 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TXNRD3NBQ6F5E7 133 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 SLC8B1Q6J4K2 584 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 CCDC70Q6NSX1 233 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 STRADAQ7RTN6 431 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 DEFB106AQ8N104 65 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 FAM172AQ8WUF8 416 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 MAIP1Q8WWC4 291 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 NDRG1Q92597 394 aaKnown RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 FAM149B1Q96BN6 582 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 NECAB3Q96P71 396 aaPredicted RBP14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 AP1M1Q9BXS5 423 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 ANKZF1Q9H8Y5 726 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 AAASQ9NRG9 546 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 SPG21Q9NZD8 308 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 STK39Q9UEW8 545 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 STAP1Q9ULZ2 295 aa14.89□□□□□ -0.03
CYB561A3-216ENST00000540755 TARSL2A2RTX5 802 aaKnown RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 MTMR11A4FU01 709 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 TNFRSF10BO14763 440 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 USP17L7P0C7H9 530 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 CPB1P15086 417 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 MCM3P25205 808 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 PPM1AP35813 382 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 ERVK-21P61565 698 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 ATP11AP98196 1134 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 DSG1Q02413 1049 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 SMC1AQ14683 1233 aaKnown RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 PSMD5Q16401 504 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 CDO1Q16878 200 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 SLC25A52Q3SY17 297 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 RSPO2Q6UXX9 243 aaPredicted RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 BHLHA9Q7RTU4 235 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 BNIPLQ7Z465 357 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 DDX53Q86TM3 631 aaKnown RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 CCDC50Q8IVM0 306 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 RIN2Q8WYP3 895 aaPredicted RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 NT5C3BQ969T7 300 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 SLITRK1Q96PX8 696 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 UHRF1Q96T88 793 aaPredicted RBP14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 TBCBQ99426 244 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 RAD9AQ99638 391 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 ZBED2Q9BTP6 218 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 TRIM62Q9BVG3 475 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
CYB561A3-216ENST00000540755 ZNF638Q14966 1978 aaKnown RBP14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 YJEFN3A6XGL0 299 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 E7ENQ6 273 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 PRPSAP2O60256 369 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 ENDOD1O94919 500 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 LTFP02788 710 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 GLUD2P49448 558 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 SLC5A3P53794 718 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 HDAC4P56524 1084 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 SIX1Q15475 284 aaPredicted RBP14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 BOLA3Q53S33 107 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 ODF2Q5BJF6 829 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 ZFYVE27Q5T4F4 411 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 KIAA1841Q6NSI8 718 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 C8orf74Q6P047 294 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 BEND5Q7L4P6 421 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 FIBCD1Q8N539 461 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 TEKT4Q8WW24 435 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 RUBCNQ92622 972 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 PGLYRP2Q96PD5 576 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 PEBP4Q96S96 227 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 NPY6RQ99463 290 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 OSBPL8Q9BZF1 889 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 SLITRK6Q9H5Y7 841 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 NGRNQ9NPE2 291 aaKnown RBP14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 RRN3Q9NYV6 651 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 PCSK1NQ9UHG2 260 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 INSL6Q9Y581 213 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 CDY1Q9Y6F8 540 aa14.87□□□□□ -0.03
CYB561A3-216ENST00000540755 LRRD1A4D1F6 860 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 MDM4O15151 490 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 FYNP06241 537 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 RARAP10276 462 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 RALAP11233 206 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 SULT1E1P49888 294 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 KLF1Q13351 362 aaPredicted RBP14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 SKIV2LQ15477 1246 aaKnown RBP14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 CYP1B1Q16678 543 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 DCAF6Q58WW2 860 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 MFSD7Q6UXD7 560 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 RNF19BQ6ZMZ0 732 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 HFE2Q6ZVN8 426 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 CYP4V2Q6ZWL3 525 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms