RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 PIWIL1Q96J94 861 aaKnown RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 CEP295NLQ96MC4 621 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 RPP25Q9BUL9 199 aaKnown RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 ULBP1Q9BZM6 244 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 NUCKS1Q9H1E3 243 aaKnown RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 ASAH2Q9NR71 780 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 SPATA6Q9NWH7 488 aaPredicted RBP17.56■□□□□ 0.4
UBC-208ENST00000540700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.56■□□□□ 0.4
UBC-208ENST00000540700 GMIPQ9P107 970 aa17.56■□□□□ 0.4
UBC-208ENST00000540700 A0A1W2PRU2 124 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 ERBB2P04626 1255 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 SERPING1P05155 500 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 USP17L7P0C7H9 530 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 LCP1P13796 627 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 GABRR2P28476 465 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 TKTL1P51854 596 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 GPC5P78333 572 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 CYP4F8P98187 520 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 PTP4A2Q12974 167 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 ASTE1Q2TB18 679 aaPredicted RBP17.55■□□□□ 0.4
UBC-208ENST00000540700 SCD5Q86SK9 330 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 CNGA4Q8IV77 575 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 ELMOD1Q8N336 334 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 STK32AQ8WU08 396 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 HSFY1Q96LI6 401 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 NMUR1Q9HB89 426 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 AVENQ9NQS1 362 aaPredicted RBP17.55■□□□□ 0.4
UBC-208ENST00000540700 SLC2A4RGQ9NR83 387 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 OSER1Q9NX31 292 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 NENFQ9UMX5 172 aa17.55■□□□□ 0.4
UBC-208ENST00000540700 ANHXE9PGG2 379 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 PAPSS1O43252 624 aaPredicted RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 ZDHHC11BP0C7U3 371 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 YWHAQP27348 245 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 EIF4A3P38919 411 aaKnown RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 CSTF1Q05048 431 aaKnown RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 TEAD2Q15562 447 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 PM20D1Q6GTS8 502 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 TMEM110Q86TL2 294 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 TMEM35BQ8NCS4 154 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 ING5Q8WYH8 240 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 FBXO32Q969P5 355 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 SHDQ96IW2 340 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 PPP1R13BQ96KQ4 1090 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 ST7Q9NRC1 585 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 CHORDC1Q9UHD1 332 aaPredicted RBP17.54■□□□□ 0.4
UBC-208ENST00000540700 SCML2Q9UQR0 700 aa17.54■□□□□ 0.4
UBC-208ENST00000540700 A0A087X0T9 212 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 ZNF840PA6NDX5 716 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 RTN3O95197 1032 aaPredicted RBP17.53■□□□□ 0.4
UBC-208ENST00000540700 LSM8O95777 96 aaKnown RBP17.53■□□□□ 0.4
UBC-208ENST00000540700 TPM1P09493 284 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 CCDC172P0C7W6 258 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 FAM228BP0C875 321 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 FECHP22830 423 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 ATXN1P54253 815 aaKnown RBP17.53■□□□□ 0.4
UBC-208ENST00000540700 SLC8A3P57103 927 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 STARD6P59095 220 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 DAOAP59103 153 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 CENPCQ03188 943 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 UBXN2BQ14CS0 331 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 CYP4A22Q5TCH4 519 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 PARM1Q6UWI2 310 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 FAM183BPQ6ZVS7 135 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 CCDC186Q7Z3E2 898 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 TMEM139Q8IV31 216 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 FMNL3Q8IVF7 1028 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 SCUBE3Q8IX30 993 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 FGF14Q92915 247 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 ZSWIM3Q96MP5 696 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 MIS12Q9H081 205 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 LRRC4Q9HBW1 653 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
UBC-208ENST00000540700 MTF2Q9Y483 593 aaPredicted RBP17.53■□□□□ 0.4
UBC-208ENST00000540700 MAP1BP46821 2468 aaKnown RBP17.53■□□□□ 0.4
UBC-208ENST00000540700 OBSL1O75147 1896 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 NCANO14594 1321 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 CHD6Q8TD26 2715 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 MYH10P35580 1976 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 A0A1W2PQH9 124 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 C2orf78A6NCI8 922 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 YJEFN3A6XGL0 299 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 E7ENQ6 273 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 MMP8P22894 467 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 FSHRP23945 695 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 GABRB2P47870 512 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
UBC-208ENST00000540700 TAF5Q15542 800 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 TAF12Q16514 161 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 TRIM72Q6ZMU5 477 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 PHLDB2Q86SQ0 1253 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 NPAS3Q8IXF0 933 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms