RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SLC2A14Q8TDB8 520 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 XPO6Q96QU8 1125 aaKnown RBP12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KLF16Q9BXK1 252 aaPredicted RBP12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 PNPLA8Q9NP80 782 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 TMEM74BQ9NUR3 256 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 WDR35Q9P2L0 1181 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 ZFHX4Q86UP3 3567 aa12.69□□□□□ -0.38
CBX3P4-202ENST00000540428 NUP205Q92621 2012 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 TMEM8BA6NDV4 472 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 C1QTNF9BB2RNN3 333 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 CACNG3O60359 315 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 BEST1O76090 585 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 F13A1P00488 732 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 MYL1P05976 194 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 C1QTNF9P0C862 333 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 CCDC130P13994 396 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ENGP17813 658 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ATP5C1P36542 298 aaKnown RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 MAP3K7CLP57077 242 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 DLG4P78352 724 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 SDE2Q6IQ49 451 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 SNX21Q969T3 373 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 WBP2Q969T9 261 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 GABRG3Q99928 467 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 EXOC1Q9NV70 894 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 DNAJC17Q9NVM6 304 aaKnown RBP12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 HCN2Q9UL51 889 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 SCML2Q9UQR0 700 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 PCDHA5Q9Y5H7 936 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 THADAQ6YHU6 1953 aa12.68□□□□□ -0.38
CBX3P4-202ENST00000540428 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 MAPK13O15264 365 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 NR3C1P04150 777 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 SERPINF2P08697 491 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 IRF1P10914 325 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 TYRP14679 529 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ITPKAP23677 461 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ASPAP45381 313 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 MAPK8P45983 427 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 PGFP49763 221 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ATXN3P54252 364 aaPredicted RBP12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 INCA1Q0VD86 236 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 SEMA3BQ13214 749 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 TADA2BQ86TJ2 420 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 MIB1Q86YT6 1006 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CHPFQ8IZ52 775 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ZNF276Q8N554 614 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 PAGE5Q96GU1 130 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 BBS2Q9BXC9 721 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 IMPG2Q9BZV3 1241 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CYP3A43Q9HB55 503 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CD248Q9HCU0 757 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 HMGXB4Q9UGU5 601 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 SERTAD1Q9UHV2 236 aa12.67□□□□□ -0.38
CBX3P4-202ENST00000540428 ATXN2Q99700 1313 aaKnown RBP12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 HHLA1C9JL84 531 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 GFRA2O00451 464 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 TRIM24O15164 1050 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 KIF20AO95235 890 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 TBX18O95935 607 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 CFIP05156 583 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 NDUFV2P19404 249 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 PIK3CAP42336 1068 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 PSEN1P49768 467 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 ENPEPQ07075 957 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 Q6ZNB5 142 aa12.66□□□□□ -0.38
CBX3P4-202ENST00000540428 GRAMD1CQ8IYS0 662 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms