RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CLIC5Q9NZA1 410 aa14.46□□□□□ -0.1
SCNN1A-215ENST00000540037 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.1
SCNN1A-215ENST00000540037 PCDHGB5Q9Y5G0 923 aa14.46□□□□□ -0.1
SCNN1A-215ENST00000540037 HEY1Q9Y5J3 304 aa14.46□□□□□ -0.1
SCNN1A-215ENST00000540037 LOC100653049A0A140TA62 436 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 SDR42E2A6NKP2 422 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 KCNN4O15554 427 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 KRT34O76011 436 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 KRT37O76014 449 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 IL1BP01584 269 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 PROCP04070 461 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 OSTNP61366 133 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 CCNIQ14094 377 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 HIC1Q14526 733 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 CDO1Q16878 200 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 MARK2Q7KZI7 788 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 DHDDSQ86SQ9 333 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 CDR2LQ86X02 465 aaPredicted RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ADGRF2Q8IZF7 708 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 NMD3Q96D46 503 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ZNF668Q96K58 619 aaPredicted RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 GPATCH2LQ9NWQ4 482 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 USP18Q9UMW8 372 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 NR2E3Q9Y5X4 410 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 MAD1L1Q9Y6D9 718 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ZNF646O15015 1829 aaPredicted RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 KIAA1217Q5T5P2 1943 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 TXNDC9O14530 226 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 SNNO75324 88 aaPredicted RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 GRAP2O75791 330 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 LSM8O95777 96 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 GRIA1P42261 906 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 CDH6P55285 790 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 RPL10AP62906 217 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 TAZQ16635 292 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 DNAL1Q4LDG9 190 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 TMCO4Q5TGY1 634 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ATG16L1Q676U5 607 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 FBXL19Q6PCT2 694 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 DPH6Q7L8W6 267 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 TCHPQ9BT92 498 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 SOX13Q9UN79 622 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ADGRA2Q96PE1 1338 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
SCNN1A-215ENST00000540037 NDC80O14777 642 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 ATG7O95352 703 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 BPGMP07738 259 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 SERPINA6P08185 405 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 TFAMQ00059 246 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 USP4Q13107 963 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 STX3Q13277 289 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 TUBB3Q13509 450 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 PDCD2Q16342 344 aaPredicted RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 C15orf59Q2T9L4 293 aaPredicted RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 VSIG10LQ86VR7 867 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 HPS6Q86YV9 775 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 THNSL1Q8IYQ7 743 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 PIWIL1Q96J94 861 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 USP29Q9HBJ7 922 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 XAB2Q9HCS7 855 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 JPH1Q9HDC5 661 aaPredicted RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 PIH1D1Q9NWS0 290 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 HMGXB4Q9UGU5 601 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 DNAJC16Q9Y2G8 782 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 PSAPP07602 524 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 EIF4BP23588 611 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 RBL1P28749 1068 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 ADORA2AP29274 412 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 SP2Q02086 613 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 SLC27A3Q5K4L6 730 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 UNC5AQ6ZN44 842 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 MAVSQ7Z434 540 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 GDPD5Q8WTR4 605 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 DNAJC1Q96KC8 554 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 G3BP2Q9UN86 482 aaKnown RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 RGPD3A6NKT7 1758 aaPredicted RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 RGPD4Q7Z3J3 1758 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 GSRP00390 522 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 XYLT1Q86Y38 959 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 STKLD1Q8NE28 680 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 CMASQ8NFW8 434 aaPredicted RBP14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 NCSTNQ92542 709 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 NIF3L1Q9GZT8 377 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 EFR3BQ9Y2G0 817 aa14.44□□□□□ -0.1
SCNN1A-215ENST00000540037 TRUB2O95900 331 aaKnown RBP14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 ARRB2P32121 409 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 ASPAP45381 313 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 INHBCP55103 352 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 MED21Q13503 144 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 NOMO1Q15155 1222 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 TRNP1Q6NT89 227 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 ACAD11Q709F0 780 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 TBC1D30Q9Y2I9 924 aa14.43□□□□□ -0.1
SCNN1A-215ENST00000540037 SLC15A5A6NIM6 579 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms