RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 NAP1L1P55209 391 aaKnown RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 YWHAGP61981 247 aaKnown RBP eCLIP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 OGDHQ02218 1023 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CTC1Q2NKJ3 1217 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 BSPRYQ5W0U4 402 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MON1AQ86VX9 555 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF512Q96ME7 567 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SLITRK1Q96PX8 696 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF334Q9HCZ1 680 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZDHHC7Q9NXF8 308 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 EHD2Q9NZN4 543 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ANAPC7Q9UJX3 599 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PATJQ8NI35 1801 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GOLGA6L9A6NEM1 432 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 C2CD4BA6NLJ0 364 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TBX10O75333 385 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 LEXMQ3ZCV2 418 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ARCQ7LC44 396 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DEFB106AQ8N104 65 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ELMOD1Q8N336 334 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 RNF10Q8N5U6 811 aaKnown RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 C12orf76Q8N812 135 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TPCN2Q8NHX9 752 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NECAB3Q96P71 396 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 UHRF1Q96T88 793 aaPredicted RBP19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 LRRC3Q9BY71 257 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 POPDC2Q9HBU9 364 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 OSER1Q9NX31 292 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CLDND1Q9NY35 253 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CLEC1BQ9P126 229 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CAPN6Q9Y6Q1 641 aa19.81■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SPDYE4A6NLX3 237 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DAB1O75553 588 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZDHHC11BP0C7U3 371 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF252P-AS1Q0IIN9 211 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SYPL2Q5VXT5 272 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ELMSAN1Q6PJG2 1045 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TMEM184AQ6ZMB5 413 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 EP400NLQ6ZTU2 488 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TMC8Q8IU68 726 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HS6ST3Q8IZP7 471 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 RXFP2Q8WXD0 754 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 EDEM1Q92611 657 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CASP10Q92851 521 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF707Q96C28 371 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SLC2A13Q96QE2 648 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 IL21Q9HBE4 155 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NAALADL1Q9UQQ1 740 aa19.8■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CCDC195A0A1B0GUA6 201 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MYO1FO00160 1098 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 BUB1BO60566 1050 aaPredicted RBP19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TADA3O75528 432 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PDGFRAP16234 1089 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GPD1P21695 349 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TMEM150AQ86TG1 271 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 FNIP1Q8TF40 1166 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 OVCA2Q8WZ82 227 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GOLGA1Q92805 767 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CORO1BQ9BR76 489 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DDX23Q9BUQ8 820 aaKnown RBP19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 APOL5Q9BWW9 433 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PRKD2Q9BZL6 878 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TLR8Q9NR97 1041 aaKnown RBP19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 HCFC1R1Q9NWW0 138 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 UXTQ9UBK9 157 aaPredicted RBP19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CDH22Q9UJ99 828 aa19.79■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GRID2IPA4D2P6 1211 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 H3BQ06 376 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NCK2O43639 380 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 F11P03951 625 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NCAM1P13591 858 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MSNP26038 577 aaKnown RBP19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MATKP42679 507 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PITX1P78337 314 aaPredicted RBP19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MESDQ14696 234 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CCDC14Q49A88 953 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DCAF6Q58WW2 860 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 BTBD8Q5XKL5 378 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ARHGAP18Q8N392 663 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PDZD8Q8NEN9 1154 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CFAP57Q96MR6 1250 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GOLPH3Q9H4A6 298 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ABCC13Q9NSE7 274 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DZANK1Q9NVP4 752 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 DNMT3BQ9UBC3 853 aaKnown RBP19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MYH10P35580 1976 aa19.78■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF840PA6NDX5 716 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TMEM110-MUSTN1A8MSY1 372 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CAPN9O14815 690 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 XYLBO75191 536 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PALMO75781 387 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PAPLNO95428 1278 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 POU2F2P09086 479 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TFE3P19532 575 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PSMA2P25787 234 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NOS2P35228 1153 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 PSEN1P49768 467 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ZNF143P52747 638 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms