RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 WARS2Q9UGM6 360 aaKnown RBP10.37□□□□□ -0.75
TRAF1-202ENST00000540010 APOL1O14791 398 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 NPTXRO95502 500 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 CBX6O95503 412 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 SNRPAP09012 282 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MRPS35P82673 323 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 TMTC4Q5T4D3 741 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 LLGL2Q6P1M3 1020 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MSL3Q8N5Y2 521 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 FBXO36Q8NEA4 188 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 TMA16Q96EY4 203 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 C16orf70Q9BSU1 422 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 ZFYVE28Q9HCC9 887 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 CHST7Q9NS84 486 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 KRT82Q9NSB4 513 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 IRAK4Q9NWZ3 460 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 FSBPO95073 299 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 GJB6O95452 261 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 FLT3P36888 993 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 SATB1Q01826 763 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 LRRC6Q86X45 466 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 SUGP1Q8IWZ8 645 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 KIAA0319LQ8IZA0 1049 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 EMC1Q8N766 993 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 OR6P1Q8NGX9 317 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MAGEB18Q96M61 343 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 OSMRQ99650 979 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 DDX3YO15523 660 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MYL2P10916 166 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 SSTR1P30872 391 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 RGS2P41220 211 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 CDH8P55286 799 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 ARPP19P56211 112 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 CENPCQ03188 943 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 KYAT1Q16773 422 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MAMDC4Q6UXC1 1216 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MTO1Q9Y2Z2 717 aaKnown RBP10.36□□□□□ -0.75
TRAF1-202ENST00000540010 ZNF711Q9Y462 761 aa10.36□□□□□ -0.75
TRAF1-202ENST00000540010 MCM3APO60318 1980 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 COL1A2P08123 1366 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 HOXC6P09630 235 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 HSPA8P11142 646 aaKnown RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 ARL13BQ3SXY8 428 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 PDZD7Q9H5P4 517 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 SPC25Q9HBM1 224 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 ANGPTL3Q9Y5C1 460 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 B4GALT4O60513 344 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 SUPT3HO75486 399 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 ACO1P21399 889 aaKnown RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 VHLP40337 213 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 CPT1AP50416 773 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 IRX1P78414 480 aaPredicted RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 BEX3Q00994 111 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 OTUD4Q01804 1114 aaKnown RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 KLC3Q6P597 504 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 DSTYKQ6XUX3 929 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 IFNEQ86WN2 208 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 ACTL9Q8TC94 416 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 HPDLQ96IR7 371 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 PWWP2AQ96N64 755 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 WHRNQ9P202 907 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 TRIM33Q9UPN9 1127 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 CFHP08603 1231 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 C6orf222P0C671 652 aaPredicted RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 SMIM10L2AP0DMW4 78 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 SMIM10L2BP0DMW5 78 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 KPNA2P52292 529 aaKnown RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 KCNJ2P63252 427 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 TAP1Q03518 808 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 YWHAHQ04917 246 aaPredicted RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 RGMBQ6NW40 437 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 PPIL6Q8IXY8 311 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 FSD1LQ9BXM9 530 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 FOXP3Q9BZS1 431 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 DRC3Q9H069 523 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 RXFP1Q9HBX9 757 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 AURKCQ9UQB9 309 aa10.35□□□□□ -0.75
TRAF1-202ENST00000540010 PIN4Q9Y237 131 aaKnown RBP10.35□□□□□ -0.75
TRAF1-202ENST00000540010 HNRNPCL1O60812 293 aaKnown RBP10.34□□□□□ -0.75
TRAF1-202ENST00000540010 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 UNGP13051 313 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-202ENST00000540010 EPHB2P29323 1055 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
TRAF1-202ENST00000540010 NOMO3P69849 1222 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 RBP5P82980 135 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 MFSD10Q14728 455 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 CST9Q5W186 159 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 IL31Q6EBC2 164 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 CPNE8Q86YQ8 564 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 RASGEF1CQ8N431 466 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 AVENQ9NQS1 362 aaPredicted RBP10.34□□□□□ -0.75
TRAF1-202ENST00000540010 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 HUS1O60921 280 aa10.34□□□□□ -0.75
TRAF1-202ENST00000540010 CCL14Q16627 93 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms