RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CEP104O60308 925 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 SPATA31D3P0C874 917 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 TFE3P19532 575 aaPredicted RBP16.88■□□□□ 0.29
TRAF3-204ENST00000539721 MIPP30301 263 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 PCK1P35558 622 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 IRS1P35568 1242 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 VEPH1Q14D04 833 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 RAB6CQ53S08 254 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 ZFYVE27Q5T4F4 411 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 DCAF12L1Q5VU92 463 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 SPATA31D4Q6ZUB0 917 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 MON1AQ86VX9 555 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 TDHQ8IZJ6 230 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 ARHGAP18Q8N392 663 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 RAB6CQ9H0N0 254 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 CARD9Q9H257 536 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 ABCC13Q9NSE7 274 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 GMIPQ9P107 970 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 PCSK1NQ9UHG2 260 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 INSL5Q9Y5Q6 135 aa16.88■□□□□ 0.29
TRAF3-204ENST00000539721 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
TRAF3-204ENST00000539721 A0A1W2PQH9 124 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 FAM92AA1XBS5 289 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SLC25A11Q02978 314 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 TWF1Q12792 350 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 ZNF211Q13398 564 aaPredicted RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CAMK1Q14012 370 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 TAF12Q16514 161 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CCDC181Q5TID7 509 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 LRRC38Q5VT99 294 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SCYL2Q6P3W7 929 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 STRADAQ7RTN6 431 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SCD5Q86SK9 330 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SLC7A14Q8TBB6 771 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 NPY6RQ99463 290 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 TTLL2Q9BWV7 592 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SLC28A3Q9HAS3 691 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 RRN3Q9NYV6 651 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 EHD2Q9NZN4 543 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SYNJ2BP-COX16A0A087WUM0 186 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 M0QYT0 321 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 PRPSAP2O60256 369 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 TRUB2O95900 331 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 GLUD1P00367 558 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 KRT7P08729 469 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CSH1P0DML2 217 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CSH2P0DML3 217 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 HDAC4P56524 1084 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 TAF10Q12962 218 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 PLD1Q13393 1074 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SEL1L2Q5TEA6 688 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 PDE12Q6L8Q7 609 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 LILRA6Q6PI73 481 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 BEND5Q7L4P6 421 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 POLNQ7Z5Q5 900 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 CREG2Q8IUH2 290 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 KATNAL2Q8IYT4 538 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 ARNTL2Q8WYA1 636 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 NT5C3BQ969T7 300 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 DDX56Q9NY93 547 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 COX16Q9P0S2 106 aa16.87■□□□□ 0.29
TRAF3-204ENST00000539721 MTCL1Q9Y4B5 1905 aaKnown RBP16.87■□□□□ 0.29
TRAF3-204ENST00000539721 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
TRAF3-204ENST00000539721 KRT1P04264 644 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 IL1R2P27930 398 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 PAFAH1B1P43034 410 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 PGFP49763 221 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 EPHB3P54753 998 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 DEUP1Q05D60 604 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
TRAF3-204ENST00000539721 ATP13A4Q4VNC1 1196 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 OTUD1Q5VV17 481 aaPredicted RBP16.86■□□□□ 0.29
TRAF3-204ENST00000539721 TXNRD3NBQ6F5E7 133 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 CCDC149Q6ZUS6 474 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 KREMEN2Q8NCW0 462 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 PEBP4Q96S96 227 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 CARD6Q9BX69 1037 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 FAM204AQ9H8W3 233 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
TRAF3-204ENST00000539721 KLHL11Q9NVR0 708 aa16.86■□□□□ 0.29
TRAF3-204ENST00000539721 PYGMP11217 842 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 RDXP35241 583 aaKnown RBP16.85■□□□□ 0.29
TRAF3-204ENST00000539721 PSEN1P49768 467 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 ATXN1P54253 815 aaKnown RBP16.85■□□□□ 0.29
TRAF3-204ENST00000539721 NME3Q13232 169 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 SMTNL2Q2TAL5 461 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 ATG2AQ2TAZ0 1938 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 ODF2Q5BJF6 829 aa16.85■□□□□ 0.29
TRAF3-204ENST00000539721 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms